Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 Gm28911-201ENSMUST00000188837 117 ntBASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ClcnkaQ9WUB7 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
ClcnkaQ9WUB7 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
ClcnkaQ9WUB7 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
ClcnkaQ9WUB7 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
ClcnkaQ9WUB7 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
ClcnkaQ9WUB7 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
ClcnkaQ9WUB7 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ClcnkaQ9WUB7 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ClcnkaQ9WUB7 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ClcnkaQ9WUB7 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ClcnkaQ9WUB7 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ClcnkaQ9WUB7 Mir874-201ENSMUST00000104769 76 ntBASIC12.06□□□□□ -0.48
ClcnkaQ9WUB7 Gm11918-201ENSMUST00000121660 179 ntBASIC12.06□□□□□ -0.48
ClcnkaQ9WUB7 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.06□□□□□ -0.48
ClcnkaQ9WUB7 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.06□□□□□ -0.48
ClcnkaQ9WUB7 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ClcnkaQ9WUB7 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
ClcnkaQ9WUB7 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.06□□□□□ -0.48
ClcnkaQ9WUB7 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.06□□□□□ -0.48
ClcnkaQ9WUB7 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.06□□□□□ -0.48
ClcnkaQ9WUB7 Gm45384-201ENSMUST00000210451 277 ntBASIC12.06□□□□□ -0.48
ClcnkaQ9WUB7 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.06□□□□□ -0.48
ClcnkaQ9WUB7 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.06□□□□□ -0.48
ClcnkaQ9WUB7 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
ClcnkaQ9WUB7 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ClcnkaQ9WUB7 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ClcnkaQ9WUB7 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
ClcnkaQ9WUB7 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ClcnkaQ9WUB7 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ClcnkaQ9WUB7 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ClcnkaQ9WUB7 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ClcnkaQ9WUB7 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
ClcnkaQ9WUB7 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ClcnkaQ9WUB7 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ClcnkaQ9WUB7 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ClcnkaQ9WUB7 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.06□□□□□ -0.48
ClcnkaQ9WUB7 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ClcnkaQ9WUB7 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ClcnkaQ9WUB7 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ClcnkaQ9WUB7 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ClcnkaQ9WUB7 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
ClcnkaQ9WUB7 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ClcnkaQ9WUB7 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ClcnkaQ9WUB7 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ClcnkaQ9WUB7 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ClcnkaQ9WUB7 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
ClcnkaQ9WUB7 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ClcnkaQ9WUB7 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ClcnkaQ9WUB7 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
ClcnkaQ9WUB7 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
ClcnkaQ9WUB7 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ClcnkaQ9WUB7 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ClcnkaQ9WUB7 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ClcnkaQ9WUB7 Gm2495-201ENSMUST00000191160 466 ntBASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms