Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Col25a1Q99MQ5 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col25a1Q99MQ5 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Col25a1Q99MQ5 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.54□□□□□ -0.24
Col25a1Q99MQ5 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col25a1Q99MQ5 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Col25a1Q99MQ5 Gm14109-201ENSMUST00000118814 309 ntBASIC13.54□□□□□ -0.24
Col25a1Q99MQ5 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col25a1Q99MQ5 Rmrp-201ENSMUST00000157463 271 ntBASIC13.54□□□□□ -0.24
Col25a1Q99MQ5 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC13.54□□□□□ -0.24
Col25a1Q99MQ5 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.54□□□□□ -0.24
Col25a1Q99MQ5 Gm8885-201ENSMUST00000189382 598 ntBASIC13.54□□□□□ -0.24
Col25a1Q99MQ5 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.54□□□□□ -0.24
Col25a1Q99MQ5 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col25a1Q99MQ5 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.54□□□□□ -0.24
Col25a1Q99MQ5 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col25a1Q99MQ5 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Col25a1Q99MQ5 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col25a1Q99MQ5 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.54□□□□□ -0.24
Col25a1Q99MQ5 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Col25a1Q99MQ5 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col25a1Q99MQ5 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col25a1Q99MQ5 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col25a1Q99MQ5 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Col25a1Q99MQ5 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.54□□□□□ -0.24
Col25a1Q99MQ5 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col25a1Q99MQ5 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col25a1Q99MQ5 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col25a1Q99MQ5 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.54□□□□□ -0.24
Col25a1Q99MQ5 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Col25a1Q99MQ5 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col25a1Q99MQ5 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.54□□□□□ -0.24
Col25a1Q99MQ5 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col25a1Q99MQ5 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col25a1Q99MQ5 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col25a1Q99MQ5 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col25a1Q99MQ5 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Col25a1Q99MQ5 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col25a1Q99MQ5 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col25a1Q99MQ5 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col25a1Q99MQ5 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col25a1Q99MQ5 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Col25a1Q99MQ5 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col25a1Q99MQ5 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.53□□□□□ -0.24
Col25a1Q99MQ5 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC13.53□□□□□ -0.24
Col25a1Q99MQ5 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col25a1Q99MQ5 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col25a1Q99MQ5 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC13.53□□□□□ -0.24
Col25a1Q99MQ5 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col25a1Q99MQ5 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC13.53□□□□□ -0.24
Col25a1Q99MQ5 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC13.53□□□□□ -0.24
Col25a1Q99MQ5 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.53□□□□□ -0.24
Col25a1Q99MQ5 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC13.53□□□□□ -0.24
Col25a1Q99MQ5 Gm34023-201ENSMUST00000195539 217 ntBASIC13.53□□□□□ -0.24
Col25a1Q99MQ5 Gm43752-201ENSMUST00000198475 697 ntBASIC13.53□□□□□ -0.24
Col25a1Q99MQ5 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col25a1Q99MQ5 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.53□□□□□ -0.24
Col25a1Q99MQ5 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col25a1Q99MQ5 AC123665.1-201ENSMUST00000228204 438 ntBASIC13.53□□□□□ -0.24
Col25a1Q99MQ5 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.53□□□□□ -0.24
Col25a1Q99MQ5 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Col25a1Q99MQ5 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Col25a1Q99MQ5 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Col25a1Q99MQ5 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col25a1Q99MQ5 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col25a1Q99MQ5 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col25a1Q99MQ5 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.53□□□□□ -0.24
Col25a1Q99MQ5 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Col25a1Q99MQ5 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.53□□□□□ -0.24
Col25a1Q99MQ5 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col25a1Q99MQ5 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col25a1Q99MQ5 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col25a1Q99MQ5 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Col25a1Q99MQ5 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col25a1Q99MQ5 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Col25a1Q99MQ5 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col25a1Q99MQ5 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col25a1Q99MQ5 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Col25a1Q99MQ5 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col25a1Q99MQ5 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
Col25a1Q99MQ5 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col25a1Q99MQ5 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Col25a1Q99MQ5 Gm25214-201ENSMUST00000104573 129 ntBASIC13.52□□□□□ -0.25
Col25a1Q99MQ5 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col25a1Q99MQ5 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col25a1Q99MQ5 Gm12628-201ENSMUST00000122193 382 ntBASIC13.52□□□□□ -0.25
Col25a1Q99MQ5 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC13.52□□□□□ -0.25
Col25a1Q99MQ5 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.52□□□□□ -0.25
Col25a1Q99MQ5 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col25a1Q99MQ5 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col25a1Q99MQ5 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Col25a1Q99MQ5 Gm8738-201ENSMUST00000172606 329 ntBASIC13.52□□□□□ -0.25
Col25a1Q99MQ5 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Col25a1Q99MQ5 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Col25a1Q99MQ5 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Col25a1Q99MQ5 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Col25a1Q99MQ5 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Col25a1Q99MQ5 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Col25a1Q99MQ5 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Col25a1Q99MQ5 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms