Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TM9SF4Q92544 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.26■□□□□ 0.03
TM9SF4Q92544 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.26■□□□□ 0.03
TM9SF4Q92544 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.26■□□□□ 0.03
TM9SF4Q92544 AL353705.2-201ENST00000428243 662 ntBASIC15.26■□□□□ 0.03
TM9SF4Q92544 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.26■□□□□ 0.03
TM9SF4Q92544 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TM9SF4Q92544 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TM9SF4Q92544 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.26■□□□□ 0.03
TM9SF4Q92544 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.26■□□□□ 0.03
TM9SF4Q92544 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.26■□□□□ 0.03
TM9SF4Q92544 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.26■□□□□ 0.03
TM9SF4Q92544 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.26■□□□□ 0.03
TM9SF4Q92544 AC073389.1-201ENST00000595595 795 ntBASIC15.26■□□□□ 0.03
TM9SF4Q92544 AC007967.4-201ENST00000614700 386 ntBASIC15.26■□□□□ 0.03
TM9SF4Q92544 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.26■□□□□ 0.03
TM9SF4Q92544 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TM9SF4Q92544 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TM9SF4Q92544 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.26■□□□□ 0.03
TM9SF4Q92544 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TM9SF4Q92544 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TM9SF4Q92544 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.26■□□□□ 0.03
TM9SF4Q92544 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TM9SF4Q92544 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TM9SF4Q92544 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TM9SF4Q92544 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.26■□□□□ 0.03
TM9SF4Q92544 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TM9SF4Q92544 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TM9SF4Q92544 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
TM9SF4Q92544 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.26■□□□□ 0.03
TM9SF4Q92544 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.26■□□□□ 0.03
TM9SF4Q92544 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TM9SF4Q92544 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TM9SF4Q92544 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TM9SF4Q92544 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.25■□□□□ 0.03
TM9SF4Q92544 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TM9SF4Q92544 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TM9SF4Q92544 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TM9SF4Q92544 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TM9SF4Q92544 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TM9SF4Q92544 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TM9SF4Q92544 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TM9SF4Q92544 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TM9SF4Q92544 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TM9SF4Q92544 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.25■□□□□ 0.03
TM9SF4Q92544 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TM9SF4Q92544 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.25■□□□□ 0.03
TM9SF4Q92544 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TM9SF4Q92544 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
TM9SF4Q92544 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TM9SF4Q92544 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
TM9SF4Q92544 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TM9SF4Q92544 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TM9SF4Q92544 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.25■□□□□ 0.03
TM9SF4Q92544 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.25■□□□□ 0.03
TM9SF4Q92544 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TM9SF4Q92544 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TM9SF4Q92544 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TM9SF4Q92544 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.25■□□□□ 0.03
TM9SF4Q92544 AC142381.1-201ENST00000426099 345 ntBASIC15.25■□□□□ 0.03
TM9SF4Q92544 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.25■□□□□ 0.03
TM9SF4Q92544 UGT1A2P-201ENST00000454886 866 ntBASIC15.25■□□□□ 0.03
TM9SF4Q92544 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.25■□□□□ 0.03
TM9SF4Q92544 PRYP6-201ENST00000514804 343 ntBASIC15.25■□□□□ 0.03
TM9SF4Q92544 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.25■□□□□ 0.03
TM9SF4Q92544 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.25■□□□□ 0.03
TM9SF4Q92544 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.25■□□□□ 0.03
TM9SF4Q92544 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.25■□□□□ 0.03
TM9SF4Q92544 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TM9SF4Q92544 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TM9SF4Q92544 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.25■□□□□ 0.03
TM9SF4Q92544 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TM9SF4Q92544 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.25■□□□□ 0.03
TM9SF4Q92544 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.25■□□□□ 0.03
TM9SF4Q92544 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TM9SF4Q92544 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TM9SF4Q92544 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TM9SF4Q92544 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TM9SF4Q92544 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TM9SF4Q92544 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TM9SF4Q92544 AC092850.2-201ENST00000623821 2697 ntBASIC15.24■□□□□ 0.03
TM9SF4Q92544 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM9SF4Q92544 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM9SF4Q92544 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TM9SF4Q92544 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.24■□□□□ 0.03
TM9SF4Q92544 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TM9SF4Q92544 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TM9SF4Q92544 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.24■□□□□ 0.03
TM9SF4Q92544 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TM9SF4Q92544 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
TM9SF4Q92544 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM9SF4Q92544 PIN1P1-201ENST00000412108 996 ntBASIC15.24■□□□□ 0.03
TM9SF4Q92544 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.24■□□□□ 0.03
TM9SF4Q92544 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.24■□□□□ 0.03
TM9SF4Q92544 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.24■□□□□ 0.03
TM9SF4Q92544 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.24■□□□□ 0.03
TM9SF4Q92544 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.24■□□□□ 0.03
TM9SF4Q92544 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.24■□□□□ 0.03
TM9SF4Q92544 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.24■□□□□ 0.03
TM9SF4Q92544 AC004233.3-201ENST00000607794 1269 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms