Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Col20a1Q923P0 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col20a1Q923P0 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col20a1Q923P0 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col20a1Q923P0 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col20a1Q923P0 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Col20a1Q923P0 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC15.4■□□□□ 0.06
Col20a1Q923P0 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC15.4■□□□□ 0.06
Col20a1Q923P0 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC15.4■□□□□ 0.06
Col20a1Q923P0 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col20a1Q923P0 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col20a1Q923P0 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.06
Col20a1Q923P0 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col20a1Q923P0 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col20a1Q923P0 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC15.39■□□□□ 0.05
Col20a1Q923P0 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col20a1Q923P0 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col20a1Q923P0 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Col20a1Q923P0 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Col20a1Q923P0 Gm15459-201ENSMUST00000117405 1941 ntBASIC15.39■□□□□ 0.05
Col20a1Q923P0 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC15.39■□□□□ 0.05
Col20a1Q923P0 Gm8355-201ENSMUST00000177767 1941 ntBASIC15.39■□□□□ 0.05
Col20a1Q923P0 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col20a1Q923P0 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col20a1Q923P0 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Col20a1Q923P0 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col20a1Q923P0 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col20a1Q923P0 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col20a1Q923P0 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col20a1Q923P0 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Col20a1Q923P0 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col20a1Q923P0 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col20a1Q923P0 Gm6198-201ENSMUST00000191337 2929 ntBASIC15.39■□□□□ 0.05
Col20a1Q923P0 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col20a1Q923P0 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col20a1Q923P0 Gm8228-201ENSMUST00000189949 2192 ntBASIC15.39■□□□□ 0.05
Col20a1Q923P0 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col20a1Q923P0 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC15.39■□□□□ 0.05
Col20a1Q923P0 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Col20a1Q923P0 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC15.39■□□□□ 0.05
Col20a1Q923P0 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC15.39■□□□□ 0.05
Col20a1Q923P0 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC15.39■□□□□ 0.05
Col20a1Q923P0 Gm7895-201ENSMUST00000187459 1173 ntBASIC15.39■□□□□ 0.05
Col20a1Q923P0 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Col20a1Q923P0 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Col20a1Q923P0 Gm21769-201ENSMUST00000211922 111 ntBASIC15.39■□□□□ 0.05
Col20a1Q923P0 AC132317.1-201ENSMUST00000227227 962 ntBASIC15.39■□□□□ 0.05
Col20a1Q923P0 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col20a1Q923P0 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Col20a1Q923P0 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col20a1Q923P0 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Col20a1Q923P0 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col20a1Q923P0 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col20a1Q923P0 AC154262.2-201ENSMUST00000224310 2293 ntBASIC15.39■□□□□ 0.05
Col20a1Q923P0 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col20a1Q923P0 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Col20a1Q923P0 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col20a1Q923P0 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Col20a1Q923P0 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col20a1Q923P0 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col20a1Q923P0 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col20a1Q923P0 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Col20a1Q923P0 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col20a1Q923P0 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Col20a1Q923P0 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col20a1Q923P0 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Col20a1Q923P0 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Col20a1Q923P0 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col20a1Q923P0 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col20a1Q923P0 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col20a1Q923P0 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col20a1Q923P0 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col20a1Q923P0 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col20a1Q923P0 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Col20a1Q923P0 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col20a1Q923P0 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col20a1Q923P0 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Col20a1Q923P0 Gm13492-201ENSMUST00000119772 665 ntBASIC15.38■□□□□ 0.05
Col20a1Q923P0 Gm11964-201ENSMUST00000120982 444 ntBASIC15.38■□□□□ 0.05
Col20a1Q923P0 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Col20a1Q923P0 Gm13316-201ENSMUST00000140537 691 ntBASIC15.38■□□□□ 0.05
Col20a1Q923P0 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC15.38■□□□□ 0.05
Col20a1Q923P0 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Col20a1Q923P0 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col20a1Q923P0 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col20a1Q923P0 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col20a1Q923P0 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Col20a1Q923P0 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col20a1Q923P0 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Col20a1Q923P0 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col20a1Q923P0 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Col20a1Q923P0 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col20a1Q923P0 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col20a1Q923P0 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
Col20a1Q923P0 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col20a1Q923P0 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Col20a1Q923P0 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col20a1Q923P0 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col20a1Q923P0 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col20a1Q923P0 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms