Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nup35Q8R4R6 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Nup35Q8R4R6 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.66□□□□□ -0.7
Nup35Q8R4R6 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Nup35Q8R4R6 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Nup35Q8R4R6 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup35Q8R4R6 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nup35Q8R4R6 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nup35Q8R4R6 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC10.66□□□□□ -0.7
Nup35Q8R4R6 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC10.66□□□□□ -0.7
Nup35Q8R4R6 Gm43703-201ENSMUST00000200523 763 ntBASIC10.66□□□□□ -0.7
Nup35Q8R4R6 AC133598.3-202ENSMUST00000224219 531 ntBASIC10.66□□□□□ -0.7
Nup35Q8R4R6 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup35Q8R4R6 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup35Q8R4R6 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup35Q8R4R6 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup35Q8R4R6 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup35Q8R4R6 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup35Q8R4R6 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC10.66□□□□□ -0.7
Nup35Q8R4R6 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup35Q8R4R6 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup35Q8R4R6 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup35Q8R4R6 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup35Q8R4R6 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Nup35Q8R4R6 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup35Q8R4R6 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup35Q8R4R6 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nup35Q8R4R6 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup35Q8R4R6 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup35Q8R4R6 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup35Q8R4R6 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup35Q8R4R6 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup35Q8R4R6 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup35Q8R4R6 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.66□□□□□ -0.7
Nup35Q8R4R6 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Nup35Q8R4R6 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nup35Q8R4R6 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup35Q8R4R6 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nup35Q8R4R6 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nup35Q8R4R6 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Nup35Q8R4R6 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nup35Q8R4R6 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nup35Q8R4R6 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nup35Q8R4R6 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Nup35Q8R4R6 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nup35Q8R4R6 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nup35Q8R4R6 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nup35Q8R4R6 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nup35Q8R4R6 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nup35Q8R4R6 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nup35Q8R4R6 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nup35Q8R4R6 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC10.65□□□□□ -0.7
Nup35Q8R4R6 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC10.65□□□□□ -0.7
Nup35Q8R4R6 Gm4995-201ENSMUST00000117247 432 ntBASIC10.65□□□□□ -0.7
Nup35Q8R4R6 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC10.65□□□□□ -0.7
Nup35Q8R4R6 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nup35Q8R4R6 Gm38144-201ENSMUST00000192790 465 ntBASIC10.65□□□□□ -0.7
Nup35Q8R4R6 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Nup35Q8R4R6 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nup35Q8R4R6 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nup35Q8R4R6 Gm5161-201ENSMUST00000075243 853 ntBASIC10.65□□□□□ -0.7
Nup35Q8R4R6 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Nup35Q8R4R6 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nup35Q8R4R6 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nup35Q8R4R6 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10.65□□□□□ -0.7
Nup35Q8R4R6 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nup35Q8R4R6 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nup35Q8R4R6 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nup35Q8R4R6 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nup35Q8R4R6 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Nup35Q8R4R6 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.65□□□□□ -0.7
Nup35Q8R4R6 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nup35Q8R4R6 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Nup35Q8R4R6 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nup35Q8R4R6 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nup35Q8R4R6 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Nup35Q8R4R6 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Nup35Q8R4R6 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Nup35Q8R4R6 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Nup35Q8R4R6 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Nup35Q8R4R6 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC10.65□□□□□ -0.71
Nup35Q8R4R6 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nup35Q8R4R6 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
Nup35Q8R4R6 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nup35Q8R4R6 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.64□□□□□ -0.71
Nup35Q8R4R6 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nup35Q8R4R6 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nup35Q8R4R6 Gm42840-201ENSMUST00000200303 2251 ntBASIC10.64□□□□□ -0.71
Nup35Q8R4R6 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nup35Q8R4R6 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nup35Q8R4R6 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nup35Q8R4R6 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC10.64□□□□□ -0.71
Nup35Q8R4R6 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.64□□□□□ -0.71
Nup35Q8R4R6 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nup35Q8R4R6 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Nup35Q8R4R6 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nup35Q8R4R6 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nup35Q8R4R6 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nup35Q8R4R6 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nup35Q8R4R6 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms