Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn1Q8K0T0 Gm5385-201ENSMUST00000118988 1559 ntBASIC15.11■□□□□ 0.01
Rtn1Q8K0T0 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn1Q8K0T0 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rtn1Q8K0T0 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Rtn1Q8K0T0 Gm37861-201ENSMUST00000193534 2869 ntBASIC15.1■□□□□ 0.01
Rtn1Q8K0T0 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rtn1Q8K0T0 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtn1Q8K0T0 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtn1Q8K0T0 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC15.1■□□□□ 0.01
Rtn1Q8K0T0 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC15.1■□□□□ 0.01
Rtn1Q8K0T0 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Rtn1Q8K0T0 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtn1Q8K0T0 Gm38094-201ENSMUST00000195864 2978 ntBASIC15.1■□□□□ 0.01
Rtn1Q8K0T0 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtn1Q8K0T0 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rtn1Q8K0T0 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtn1Q8K0T0 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtn1Q8K0T0 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rtn1Q8K0T0 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtn1Q8K0T0 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtn1Q8K0T0 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rtn1Q8K0T0 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC15.1■□□□□ 0.01
Rtn1Q8K0T0 Gm12539-201ENSMUST00000121549 1098 ntBASIC15.1■□□□□ 0.01
Rtn1Q8K0T0 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC15.1■□□□□ 0.01
Rtn1Q8K0T0 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtn1Q8K0T0 Gm8602-201ENSMUST00000184045 607 ntBASIC15.1■□□□□ 0.01
Rtn1Q8K0T0 AC134254.1-201ENSMUST00000221362 167 ntBASIC15.1■□□□□ 0.01
Rtn1Q8K0T0 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtn1Q8K0T0 Gm37844-201ENSMUST00000192473 4097 ntBASIC15.1■□□□□ 0.01
Rtn1Q8K0T0 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtn1Q8K0T0 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtn1Q8K0T0 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtn1Q8K0T0 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rtn1Q8K0T0 Gm37644-201ENSMUST00000192190 2270 ntBASIC15.1■□□□□ 0.01
Rtn1Q8K0T0 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtn1Q8K0T0 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rtn1Q8K0T0 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rtn1Q8K0T0 Gm14608-201ENSMUST00000120030 1553 ntBASIC15.1■□□□□ 0.01
Rtn1Q8K0T0 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtn1Q8K0T0 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rtn1Q8K0T0 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtn1Q8K0T0 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC15.1■□□□□ 0.01
Rtn1Q8K0T0 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rtn1Q8K0T0 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtn1Q8K0T0 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rtn1Q8K0T0 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rtn1Q8K0T0 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC15.09■□□□□ 0.01
Rtn1Q8K0T0 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rtn1Q8K0T0 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rtn1Q8K0T0 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
Rtn1Q8K0T0 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rtn1Q8K0T0 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rtn1Q8K0T0 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rtn1Q8K0T0 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rtn1Q8K0T0 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rtn1Q8K0T0 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rtn1Q8K0T0 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rtn1Q8K0T0 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC15.09■□□□□ 0.01
Rtn1Q8K0T0 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rtn1Q8K0T0 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Rtn1Q8K0T0 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Rtn1Q8K0T0 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
Rtn1Q8K0T0 Gm27331-201ENSMUST00000183705 60 ntBASIC15.09■□□□□ 0.01
Rtn1Q8K0T0 Gm37497-201ENSMUST00000195830 798 ntBASIC15.09■□□□□ 0.01
Rtn1Q8K0T0 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC15.09■□□□□ 0.01
Rtn1Q8K0T0 Gm42442-201ENSMUST00000197951 1133 ntBASIC15.09■□□□□ 0.01
Rtn1Q8K0T0 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rtn1Q8K0T0 AC130829.1-201ENSMUST00000221548 494 ntBASIC15.09■□□□□ 0.01
Rtn1Q8K0T0 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rtn1Q8K0T0 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rtn1Q8K0T0 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rtn1Q8K0T0 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rtn1Q8K0T0 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rtn1Q8K0T0 AC154849.3-201ENSMUST00000223733 1660 ntBASIC15.09■□□□□ 0.01
Rtn1Q8K0T0 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rtn1Q8K0T0 Gm15222-202ENSMUST00000228667 1726 ntBASIC15.09■□□□□ 0.01
Rtn1Q8K0T0 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC15.08■□□□□ 0.01
Rtn1Q8K0T0 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Rtn1Q8K0T0 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rtn1Q8K0T0 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Rtn1Q8K0T0 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Rtn1Q8K0T0 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rtn1Q8K0T0 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Rtn1Q8K0T0 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rtn1Q8K0T0 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Rtn1Q8K0T0 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Rtn1Q8K0T0 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Rtn1Q8K0T0 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Rtn1Q8K0T0 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Rtn1Q8K0T0 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rtn1Q8K0T0 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
Rtn1Q8K0T0 Mir686-201ENSMUST00000102174 109 ntBASIC15.08■□□□□ 0
Rtn1Q8K0T0 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rtn1Q8K0T0 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rtn1Q8K0T0 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC15.08■□□□□ 0
Rtn1Q8K0T0 Gm29705-201ENSMUST00000212598 474 ntBASIC15.08■□□□□ 0
Rtn1Q8K0T0 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Rtn1Q8K0T0 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rtn1Q8K0T0 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms