Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43aQ3TL54 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Trim43aQ3TL54 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43aQ3TL54 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trim43aQ3TL54 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim43aQ3TL54 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim43aQ3TL54 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim43aQ3TL54 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim43aQ3TL54 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim43aQ3TL54 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim43aQ3TL54 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trim43aQ3TL54 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim43aQ3TL54 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim43aQ3TL54 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim43aQ3TL54 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim43aQ3TL54 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim43aQ3TL54 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim43aQ3TL54 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.88□□□□□ -0.19
Trim43aQ3TL54 Gm5866-201ENSMUST00000177881 973 ntBASIC13.88□□□□□ -0.19
Trim43aQ3TL54 Gm38294-201ENSMUST00000192831 381 ntBASIC13.88□□□□□ -0.19
Trim43aQ3TL54 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.88□□□□□ -0.19
Trim43aQ3TL54 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim43aQ3TL54 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim43aQ3TL54 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.88□□□□□ -0.19
Trim43aQ3TL54 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim43aQ3TL54 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim43aQ3TL54 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trim43aQ3TL54 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim43aQ3TL54 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim43aQ3TL54 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim43aQ3TL54 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim43aQ3TL54 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim43aQ3TL54 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim43aQ3TL54 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim43aQ3TL54 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim43aQ3TL54 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim43aQ3TL54 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim43aQ3TL54 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim43aQ3TL54 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim43aQ3TL54 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim43aQ3TL54 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.87□□□□□ -0.19
Trim43aQ3TL54 Gm14719-201ENSMUST00000121891 340 ntBASIC13.87□□□□□ -0.19
Trim43aQ3TL54 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.87□□□□□ -0.19
Trim43aQ3TL54 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim43aQ3TL54 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.87□□□□□ -0.19
Trim43aQ3TL54 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.87□□□□□ -0.19
Trim43aQ3TL54 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim43aQ3TL54 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.87□□□□□ -0.19
Trim43aQ3TL54 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim43aQ3TL54 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim43aQ3TL54 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim43aQ3TL54 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Trim43aQ3TL54 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim43aQ3TL54 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trim43aQ3TL54 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.87□□□□□ -0.19
Trim43aQ3TL54 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim43aQ3TL54 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim43aQ3TL54 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43aQ3TL54 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43aQ3TL54 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43aQ3TL54 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43aQ3TL54 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43aQ3TL54 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43aQ3TL54 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43aQ3TL54 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43aQ3TL54 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43aQ3TL54 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43aQ3TL54 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43aQ3TL54 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43aQ3TL54 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43aQ3TL54 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43aQ3TL54 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43aQ3TL54 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43aQ3TL54 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43aQ3TL54 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43aQ3TL54 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trim43aQ3TL54 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43aQ3TL54 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.86□□□□□ -0.19
Trim43aQ3TL54 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43aQ3TL54 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.86□□□□□ -0.19
Trim43aQ3TL54 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.86□□□□□ -0.19
Trim43aQ3TL54 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.86□□□□□ -0.19
Trim43aQ3TL54 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.86□□□□□ -0.19
Trim43aQ3TL54 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.86□□□□□ -0.19
Trim43aQ3TL54 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.86□□□□□ -0.19
Trim43aQ3TL54 Gm17795-201ENSMUST00000214505 757 ntBASIC13.86□□□□□ -0.19
Trim43aQ3TL54 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43aQ3TL54 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.86□□□□□ -0.19
Trim43aQ3TL54 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.86□□□□□ -0.19
Trim43aQ3TL54 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trim43aQ3TL54 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.86□□□□□ -0.19
Trim43aQ3TL54 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trim43aQ3TL54 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43aQ3TL54 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43aQ3TL54 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43aQ3TL54 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trim43aQ3TL54 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43aQ3TL54 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43aQ3TL54 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim43aQ3TL54 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms