Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nhej1Q3KNJ2 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nhej1Q3KNJ2 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nhej1Q3KNJ2 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Nhej1Q3KNJ2 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nhej1Q3KNJ2 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nhej1Q3KNJ2 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nhej1Q3KNJ2 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nhej1Q3KNJ2 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nhej1Q3KNJ2 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nhej1Q3KNJ2 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Nhej1Q3KNJ2 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nhej1Q3KNJ2 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nhej1Q3KNJ2 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.95□□□□□ -0.18
Nhej1Q3KNJ2 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nhej1Q3KNJ2 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nhej1Q3KNJ2 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.94□□□□□ -0.18
Nhej1Q3KNJ2 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nhej1Q3KNJ2 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.94□□□□□ -0.18
Nhej1Q3KNJ2 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nhej1Q3KNJ2 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nhej1Q3KNJ2 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nhej1Q3KNJ2 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.94□□□□□ -0.18
Nhej1Q3KNJ2 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.94□□□□□ -0.18
Nhej1Q3KNJ2 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nhej1Q3KNJ2 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nhej1Q3KNJ2 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nhej1Q3KNJ2 Gm6447-201ENSMUST00000118905 835 ntBASIC13.94□□□□□ -0.18
Nhej1Q3KNJ2 Gm27838-201ENSMUST00000184829 128 ntBASIC13.94□□□□□ -0.18
Nhej1Q3KNJ2 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.94□□□□□ -0.18
Nhej1Q3KNJ2 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nhej1Q3KNJ2 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nhej1Q3KNJ2 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Nhej1Q3KNJ2 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nhej1Q3KNJ2 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nhej1Q3KNJ2 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nhej1Q3KNJ2 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nhej1Q3KNJ2 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.94□□□□□ -0.18
Nhej1Q3KNJ2 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nhej1Q3KNJ2 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nhej1Q3KNJ2 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nhej1Q3KNJ2 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nhej1Q3KNJ2 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
Nhej1Q3KNJ2 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Nhej1Q3KNJ2 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nhej1Q3KNJ2 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nhej1Q3KNJ2 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.93□□□□□ -0.18
Nhej1Q3KNJ2 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nhej1Q3KNJ2 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.93□□□□□ -0.18
Nhej1Q3KNJ2 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Nhej1Q3KNJ2 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nhej1Q3KNJ2 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nhej1Q3KNJ2 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nhej1Q3KNJ2 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nhej1Q3KNJ2 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nhej1Q3KNJ2 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Nhej1Q3KNJ2 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.93□□□□□ -0.18
Nhej1Q3KNJ2 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nhej1Q3KNJ2 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.93□□□□□ -0.18
Nhej1Q3KNJ2 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nhej1Q3KNJ2 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nhej1Q3KNJ2 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nhej1Q3KNJ2 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nhej1Q3KNJ2 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nhej1Q3KNJ2 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nhej1Q3KNJ2 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.93□□□□□ -0.18
Nhej1Q3KNJ2 Gm26315-201ENSMUST00000083890 321 ntBASIC13.93□□□□□ -0.18
Nhej1Q3KNJ2 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.93□□□□□ -0.18
Nhej1Q3KNJ2 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nhej1Q3KNJ2 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nhej1Q3KNJ2 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nhej1Q3KNJ2 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nhej1Q3KNJ2 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.93□□□□□ -0.18
Nhej1Q3KNJ2 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nhej1Q3KNJ2 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Nhej1Q3KNJ2 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nhej1Q3KNJ2 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nhej1Q3KNJ2 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nhej1Q3KNJ2 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nhej1Q3KNJ2 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Nhej1Q3KNJ2 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Nhej1Q3KNJ2 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nhej1Q3KNJ2 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nhej1Q3KNJ2 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nhej1Q3KNJ2 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.92□□□□□ -0.18
Nhej1Q3KNJ2 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.92□□□□□ -0.18
Nhej1Q3KNJ2 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nhej1Q3KNJ2 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nhej1Q3KNJ2 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.92□□□□□ -0.18
Nhej1Q3KNJ2 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.92□□□□□ -0.18
Nhej1Q3KNJ2 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Nhej1Q3KNJ2 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nhej1Q3KNJ2 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Nhej1Q3KNJ2 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Nhej1Q3KNJ2 Gm15487-201ENSMUST00000122373 465 ntBASIC13.92□□□□□ -0.18
Nhej1Q3KNJ2 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.92□□□□□ -0.18
Nhej1Q3KNJ2 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Nhej1Q3KNJ2 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Nhej1Q3KNJ2 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nhej1Q3KNJ2 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms