Protein–RNA interactions for Protein: Q04683

Cxcr5, C-X-C chemokine receptor type 5, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr5Q04683 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cxcr5Q04683 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cxcr5Q04683 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cxcr5Q04683 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cxcr5Q04683 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cxcr5Q04683 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cxcr5Q04683 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.45□□□□□ -0.42
Cxcr5Q04683 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Cxcr5Q04683 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cxcr5Q04683 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cxcr5Q04683 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.45□□□□□ -0.42
Cxcr5Q04683 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcr5Q04683 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcr5Q04683 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.44□□□□□ -0.42
Cxcr5Q04683 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.44□□□□□ -0.42
Cxcr5Q04683 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcr5Q04683 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcr5Q04683 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Cxcr5Q04683 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcr5Q04683 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcr5Q04683 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcr5Q04683 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Cxcr5Q04683 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.44□□□□□ -0.42
Cxcr5Q04683 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.44□□□□□ -0.42
Cxcr5Q04683 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcr5Q04683 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcr5Q04683 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.44□□□□□ -0.42
Cxcr5Q04683 Gm42550-201ENSMUST00000201553 960 ntBASIC12.44□□□□□ -0.42
Cxcr5Q04683 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Cxcr5Q04683 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcr5Q04683 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcr5Q04683 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcr5Q04683 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcr5Q04683 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.44□□□□□ -0.42
Cxcr5Q04683 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcr5Q04683 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcr5Q04683 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcr5Q04683 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.44□□□□□ -0.42
Cxcr5Q04683 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcr5Q04683 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cxcr5Q04683 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.43□□□□□ -0.42
Cxcr5Q04683 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cxcr5Q04683 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.43□□□□□ -0.42
Cxcr5Q04683 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cxcr5Q04683 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cxcr5Q04683 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Cxcr5Q04683 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.43□□□□□ -0.42
Cxcr5Q04683 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cxcr5Q04683 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cxcr5Q04683 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Cxcr5Q04683 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cxcr5Q04683 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cxcr5Q04683 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cxcr5Q04683 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cxcr5Q04683 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.43□□□□□ -0.42
Cxcr5Q04683 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cxcr5Q04683 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cxcr5Q04683 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cxcr5Q04683 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.43□□□□□ -0.42
Cxcr5Q04683 Gm6447-201ENSMUST00000118905 835 ntBASIC12.43□□□□□ -0.42
Cxcr5Q04683 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cxcr5Q04683 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cxcr5Q04683 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cxcr5Q04683 Gm27838-201ENSMUST00000184829 128 ntBASIC12.43□□□□□ -0.42
Cxcr5Q04683 Gm29667-201ENSMUST00000190817 490 ntBASIC12.43□□□□□ -0.42
Cxcr5Q04683 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.43□□□□□ -0.42
Cxcr5Q04683 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.43□□□□□ -0.42
Cxcr5Q04683 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cxcr5Q04683 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cxcr5Q04683 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.43□□□□□ -0.42
Cxcr5Q04683 Gm26315-201ENSMUST00000083890 321 ntBASIC12.43□□□□□ -0.42
Cxcr5Q04683 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cxcr5Q04683 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.43□□□□□ -0.42
Cxcr5Q04683 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cxcr5Q04683 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cxcr5Q04683 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cxcr5Q04683 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cxcr5Q04683 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cxcr5Q04683 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cxcr5Q04683 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Cxcr5Q04683 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cxcr5Q04683 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cxcr5Q04683 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cxcr5Q04683 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cxcr5Q04683 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cxcr5Q04683 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcr5Q04683 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcr5Q04683 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcr5Q04683 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.42□□□□□ -0.42
Cxcr5Q04683 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcr5Q04683 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.42□□□□□ -0.42
Cxcr5Q04683 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcr5Q04683 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcr5Q04683 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcr5Q04683 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcr5Q04683 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcr5Q04683 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcr5Q04683 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Cxcr5Q04683 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cxcr5Q04683 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms