Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 BRWD1P1-201ENST00000401091 371 ntBASIC16.8■□□□□ 0.28
MTHFRP42898 MIR1908-201ENST00000410394 80 ntBASIC16.8■□□□□ 0.28
MTHFRP42898 ACTG1P3-201ENST00000431775 1114 ntBASIC16.8■□□□□ 0.28
MTHFRP42898 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.8■□□□□ 0.28
MTHFRP42898 HIST3H2BA-201ENST00000436555 524 ntBASIC16.8■□□□□ 0.28
MTHFRP42898 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
MTHFRP42898 AL355994.2-201ENST00000447882 704 ntBASIC16.8■□□□□ 0.28
MTHFRP42898 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.8■□□□□ 0.28
MTHFRP42898 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.8■□□□□ 0.28
MTHFRP42898 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
MTHFRP42898 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.8■□□□□ 0.28
MTHFRP42898 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.8■□□□□ 0.28
MTHFRP42898 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.8■□□□□ 0.28
MTHFRP42898 RPSAP52-203ENST00000622976 1023 ntBASIC16.8■□□□□ 0.28
MTHFRP42898 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
MTHFRP42898 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
MTHFRP42898 AC018695.7-201ENST00000624587 2492 ntBASIC16.8■□□□□ 0.28
MTHFRP42898 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MTHFRP42898 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.8■□□□□ 0.28
MTHFRP42898 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MTHFRP42898 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
MTHFRP42898 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
MTHFRP42898 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MTHFRP42898 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
MTHFRP42898 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MTHFRP42898 AC011270.2-201ENST00000624293 2550 ntBASIC16.8■□□□□ 0.28
MTHFRP42898 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MTHFRP42898 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.79■□□□□ 0.28
MTHFRP42898 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MTHFRP42898 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
MTHFRP42898 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
MTHFRP42898 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.79■□□□□ 0.28
MTHFRP42898 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MTHFRP42898 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MTHFRP42898 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
MTHFRP42898 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
MTHFRP42898 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.79■□□□□ 0.28
MTHFRP42898 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MTHFRP42898 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MTHFRP42898 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MTHFRP42898 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.79■□□□□ 0.28
MTHFRP42898 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MTHFRP42898 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
MTHFRP42898 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MTHFRP42898 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MTHFRP42898 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MTHFRP42898 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.79■□□□□ 0.28
MTHFRP42898 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MTHFRP42898 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.79■□□□□ 0.28
MTHFRP42898 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.79■□□□□ 0.28
MTHFRP42898 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.79■□□□□ 0.28
MTHFRP42898 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.79■□□□□ 0.28
MTHFRP42898 GPR182-203ENST00000622922 591 ntBASIC16.79■□□□□ 0.28
MTHFRP42898 CU634019.7-201ENST00000624153 1185 ntBASIC16.79■□□□□ 0.28
MTHFRP42898 FP236241.2-201ENST00000624906 1185 ntBASIC16.79■□□□□ 0.28
MTHFRP42898 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
MTHFRP42898 CYP4F24P-201ENST00000586049 1580 ntBASIC16.79■□□□□ 0.28
MTHFRP42898 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.79■□□□□ 0.28
MTHFRP42898 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MTHFRP42898 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
MTHFRP42898 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MTHFRP42898 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
MTHFRP42898 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
MTHFRP42898 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
MTHFRP42898 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
MTHFRP42898 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
MTHFRP42898 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
MTHFRP42898 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
MTHFRP42898 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MTHFRP42898 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MTHFRP42898 AC092068.3-201ENST00000587894 2016 ntBASIC16.79■□□□□ 0.28
MTHFRP42898 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.78■□□□□ 0.28
MTHFRP42898 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.78■□□□□ 0.28
MTHFRP42898 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MTHFRP42898 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
MTHFRP42898 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.78■□□□□ 0.28
MTHFRP42898 Z97205.2-201ENST00000564697 1639 ntBASIC16.78■□□□□ 0.28
MTHFRP42898 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MTHFRP42898 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.78■□□□□ 0.28
MTHFRP42898 AC093525.8-201ENST00000624099 1342 ntBASIC16.78■□□□□ 0.28
MTHFRP42898 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.78■□□□□ 0.28
MTHFRP42898 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
MTHFRP42898 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
MTHFRP42898 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MTHFRP42898 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MTHFRP42898 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MTHFRP42898 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
MTHFRP42898 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.78■□□□□ 0.28
MTHFRP42898 RNA5SP412-201ENST00000516234 123 ntBASIC16.78■□□□□ 0.28
MTHFRP42898 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
MTHFRP42898 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
MTHFRP42898 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.78■□□□□ 0.28
MTHFRP42898 MIR4321-201ENST00000592276 80 ntBASIC16.78■□□□□ 0.28
MTHFRP42898 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.78■□□□□ 0.28
MTHFRP42898 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.78■□□□□ 0.28
MTHFRP42898 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MTHFRP42898 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MTHFRP42898 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.78■□□□□ 0.28
MTHFRP42898 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MTHFRP42898 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms