Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tpm3P21107 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Tpm3P21107 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tpm3P21107 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tpm3P21107 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Tpm3P21107 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tpm3P21107 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tpm3P21107 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tpm3P21107 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Tpm3P21107 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tpm3P21107 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC14.63□□□□□ -0.07
Tpm3P21107 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tpm3P21107 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tpm3P21107 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tpm3P21107 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tpm3P21107 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.63□□□□□ -0.07
Tpm3P21107 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm3P21107 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm3P21107 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm3P21107 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm3P21107 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm3P21107 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm3P21107 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm3P21107 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm3P21107 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Tpm3P21107 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Tpm3P21107 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm3P21107 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm3P21107 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm3P21107 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm3P21107 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm3P21107 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm3P21107 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm3P21107 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.62□□□□□ -0.07
Tpm3P21107 Gm13385-201ENSMUST00000121089 220 ntBASIC14.62□□□□□ -0.07
Tpm3P21107 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm3P21107 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
Tpm3P21107 Gm24420-201ENSMUST00000176676 59 ntBASIC14.62□□□□□ -0.07
Tpm3P21107 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm3P21107 Gm44806-201ENSMUST00000205574 2303 ntBASIC14.62□□□□□ -0.07
Tpm3P21107 Gm18636-201ENSMUST00000218846 1066 ntBASIC14.62□□□□□ -0.07
Tpm3P21107 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Tpm3P21107 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm3P21107 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm3P21107 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm3P21107 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm3P21107 Gm44758-201ENSMUST00000206096 2068 ntBASIC14.62□□□□□ -0.07
Tpm3P21107 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm3P21107 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm3P21107 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm3P21107 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Tpm3P21107 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm3P21107 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.62□□□□□ -0.07
Tpm3P21107 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Tpm3P21107 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm3P21107 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm3P21107 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm3P21107 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Tpm3P21107 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Tpm3P21107 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm3P21107 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm3P21107 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm3P21107 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm3P21107 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm3P21107 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm3P21107 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm3P21107 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm3P21107 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Tpm3P21107 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Tpm3P21107 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.61□□□□□ -0.07
Tpm3P21107 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.61□□□□□ -0.07
Tpm3P21107 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.61□□□□□ -0.07
Tpm3P21107 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm3P21107 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.61□□□□□ -0.07
Tpm3P21107 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.61□□□□□ -0.07
Tpm3P21107 Gm6916-202ENSMUST00000205523 195 ntBASIC14.61□□□□□ -0.07
Tpm3P21107 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.61□□□□□ -0.07
Tpm3P21107 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.61□□□□□ -0.07
Tpm3P21107 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm3P21107 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Tpm3P21107 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm3P21107 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm3P21107 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Tpm3P21107 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm3P21107 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm3P21107 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC14.61□□□□□ -0.07
Tpm3P21107 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm3P21107 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm3P21107 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm3P21107 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Tpm3P21107 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm3P21107 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm3P21107 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm3P21107 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm3P21107 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm3P21107 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm3P21107 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm3P21107 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm3P21107 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm3P21107 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms