Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.69□□□□□ -0.38
Cstf3Q99LI7 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Cstf3Q99LI7 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Cstf3Q99LI7 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cstf3Q99LI7 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cstf3Q99LI7 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Cstf3Q99LI7 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cstf3Q99LI7 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cstf3Q99LI7 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cstf3Q99LI7 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cstf3Q99LI7 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Cstf3Q99LI7 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.69□□□□□ -0.38
Cstf3Q99LI7 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Cstf3Q99LI7 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cstf3Q99LI7 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cstf3Q99LI7 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cstf3Q99LI7 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cstf3Q99LI7 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Cstf3Q99LI7 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cstf3Q99LI7 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cstf3Q99LI7 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.68□□□□□ -0.38
Cstf3Q99LI7 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.68□□□□□ -0.38
Cstf3Q99LI7 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.68□□□□□ -0.38
Cstf3Q99LI7 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Cstf3Q99LI7 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.68□□□□□ -0.38
Cstf3Q99LI7 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.68□□□□□ -0.38
Cstf3Q99LI7 Gm28631-201ENSMUST00000190740 334 ntBASIC12.68□□□□□ -0.38
Cstf3Q99LI7 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cstf3Q99LI7 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cstf3Q99LI7 Gm6218-201ENSMUST00000219812 628 ntBASIC12.68□□□□□ -0.38
Cstf3Q99LI7 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.68□□□□□ -0.38
Cstf3Q99LI7 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.68□□□□□ -0.38
Cstf3Q99LI7 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cstf3Q99LI7 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cstf3Q99LI7 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cstf3Q99LI7 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Cstf3Q99LI7 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cstf3Q99LI7 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cstf3Q99LI7 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cstf3Q99LI7 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.68□□□□□ -0.38
Cstf3Q99LI7 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cstf3Q99LI7 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cstf3Q99LI7 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.68□□□□□ -0.38
Cstf3Q99LI7 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cstf3Q99LI7 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cstf3Q99LI7 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cstf3Q99LI7 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cstf3Q99LI7 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Cstf3Q99LI7 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cstf3Q99LI7 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cstf3Q99LI7 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cstf3Q99LI7 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cstf3Q99LI7 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cstf3Q99LI7 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cstf3Q99LI7 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cstf3Q99LI7 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cstf3Q99LI7 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cstf3Q99LI7 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.67□□□□□ -0.38
Cstf3Q99LI7 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.67□□□□□ -0.38
Cstf3Q99LI7 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.67□□□□□ -0.38
Cstf3Q99LI7 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cstf3Q99LI7 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cstf3Q99LI7 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.67□□□□□ -0.38
Cstf3Q99LI7 Gm44855-201ENSMUST00000205725 362 ntBASIC12.67□□□□□ -0.38
Cstf3Q99LI7 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.67□□□□□ -0.38
Cstf3Q99LI7 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cstf3Q99LI7 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cstf3Q99LI7 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cstf3Q99LI7 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Cstf3Q99LI7 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cstf3Q99LI7 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cstf3Q99LI7 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cstf3Q99LI7 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cstf3Q99LI7 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cstf3Q99LI7 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cstf3Q99LI7 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cstf3Q99LI7 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cstf3Q99LI7 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Cstf3Q99LI7 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cstf3Q99LI7 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cstf3Q99LI7 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cstf3Q99LI7 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cstf3Q99LI7 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cstf3Q99LI7 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cstf3Q99LI7 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Cstf3Q99LI7 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cstf3Q99LI7 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cstf3Q99LI7 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cstf3Q99LI7 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cstf3Q99LI7 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cstf3Q99LI7 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cstf3Q99LI7 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cstf3Q99LI7 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cstf3Q99LI7 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cstf3Q99LI7 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cstf3Q99LI7 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cstf3Q99LI7 Gm12341-201ENSMUST00000119724 503 ntBASIC12.66□□□□□ -0.38
Cstf3Q99LI7 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cstf3Q99LI7 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cstf3Q99LI7 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms