Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Foxc1Q61572 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Foxc1Q61572 Mir497b-201ENSMUST00000093601 125 ntBASIC9.84□□□□□ -0.83
Foxc1Q61572 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Foxc1Q61572 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Foxc1Q61572 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC9.84□□□□□ -0.83
Foxc1Q61572 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Foxc1Q61572 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Foxc1Q61572 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Foxc1Q61572 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Foxc1Q61572 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
Foxc1Q61572 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Foxc1Q61572 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Foxc1Q61572 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Foxc1Q61572 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Foxc1Q61572 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Foxc1Q61572 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Foxc1Q61572 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Foxc1Q61572 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Foxc1Q61572 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Foxc1Q61572 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Foxc1Q61572 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Foxc1Q61572 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC9.83□□□□□ -0.84
Foxc1Q61572 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Foxc1Q61572 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Foxc1Q61572 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC9.83□□□□□ -0.84
Foxc1Q61572 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC9.83□□□□□ -0.84
Foxc1Q61572 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Foxc1Q61572 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Foxc1Q61572 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Foxc1Q61572 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Foxc1Q61572 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Foxc1Q61572 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Foxc1Q61572 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Foxc1Q61572 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC9.83□□□□□ -0.84
Foxc1Q61572 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC9.83□□□□□ -0.84
Foxc1Q61572 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Foxc1Q61572 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Foxc1Q61572 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Foxc1Q61572 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Foxc1Q61572 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Foxc1Q61572 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Foxc1Q61572 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Foxc1Q61572 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Foxc1Q61572 Gm12138-201ENSMUST00000122180 951 ntBASIC9.83□□□□□ -0.84
Foxc1Q61572 Gm13487-201ENSMUST00000122240 864 ntBASIC9.83□□□□□ -0.84
Foxc1Q61572 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC9.83□□□□□ -0.84
Foxc1Q61572 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Foxc1Q61572 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Foxc1Q61572 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Foxc1Q61572 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC9.83□□□□□ -0.84
Foxc1Q61572 Gm8602-201ENSMUST00000184045 607 ntBASIC9.83□□□□□ -0.84
Foxc1Q61572 Mir6392-201ENSMUST00000184924 108 ntBASIC9.83□□□□□ -0.84
Foxc1Q61572 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Foxc1Q61572 Gm42696-201ENSMUST00000199859 1142 ntBASIC9.83□□□□□ -0.84
Foxc1Q61572 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Foxc1Q61572 Gm21027-201ENSMUST00000219300 1236 ntBASIC9.83□□□□□ -0.84
Foxc1Q61572 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Foxc1Q61572 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Foxc1Q61572 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Foxc1Q61572 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Foxc1Q61572 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Foxc1Q61572 Gm38325-201ENSMUST00000194507 1377 ntBASIC9.83□□□□□ -0.84
Foxc1Q61572 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Foxc1Q61572 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Foxc1Q61572 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC9.83□□□□□ -0.84
Foxc1Q61572 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Foxc1Q61572 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Foxc1Q61572 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Foxc1Q61572 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Foxc1Q61572 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Foxc1Q61572 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Foxc1Q61572 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC9.83□□□□□ -0.84
Foxc1Q61572 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Foxc1Q61572 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Foxc1Q61572 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Foxc1Q61572 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Foxc1Q61572 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Foxc1Q61572 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Foxc1Q61572 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC9.83□□□□□ -0.84
Foxc1Q61572 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Foxc1Q61572 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Foxc1Q61572 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Foxc1Q61572 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Foxc1Q61572 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Foxc1Q61572 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Foxc1Q61572 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Foxc1Q61572 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Foxc1Q61572 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Foxc1Q61572 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Foxc1Q61572 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Foxc1Q61572 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Foxc1Q61572 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Foxc1Q61572 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Foxc1Q61572 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Foxc1Q61572 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Foxc1Q61572 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC9.82□□□□□ -0.84
Foxc1Q61572 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Foxc1Q61572 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC9.82□□□□□ -0.84
Foxc1Q61572 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms