Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hnf4aP49698 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hnf4aP49698 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hnf4aP49698 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hnf4aP49698 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Hnf4aP49698 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hnf4aP49698 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Hnf4aP49698 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hnf4aP49698 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hnf4aP49698 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hnf4aP49698 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Hnf4aP49698 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hnf4aP49698 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.7□□□□□ -0.38
Hnf4aP49698 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Hnf4aP49698 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hnf4aP49698 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hnf4aP49698 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hnf4aP49698 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hnf4aP49698 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hnf4aP49698 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hnf4aP49698 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hnf4aP49698 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hnf4aP49698 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hnf4aP49698 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hnf4aP49698 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hnf4aP49698 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hnf4aP49698 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hnf4aP49698 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hnf4aP49698 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.7□□□□□ -0.38
Hnf4aP49698 Gm15429-201ENSMUST00000151268 798 ntBASIC12.7□□□□□ -0.38
Hnf4aP49698 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.7□□□□□ -0.38
Hnf4aP49698 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hnf4aP49698 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hnf4aP49698 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Hnf4aP49698 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.7□□□□□ -0.38
Hnf4aP49698 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.7□□□□□ -0.38
Hnf4aP49698 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hnf4aP49698 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hnf4aP49698 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Hnf4aP49698 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hnf4aP49698 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hnf4aP49698 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hnf4aP49698 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.7□□□□□ -0.38
Hnf4aP49698 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.7□□□□□ -0.38
Hnf4aP49698 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hnf4aP49698 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hnf4aP49698 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hnf4aP49698 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hnf4aP49698 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.7□□□□□ -0.38
Hnf4aP49698 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hnf4aP49698 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hnf4aP49698 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hnf4aP49698 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hnf4aP49698 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hnf4aP49698 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hnf4aP49698 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hnf4aP49698 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hnf4aP49698 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hnf4aP49698 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hnf4aP49698 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.69□□□□□ -0.38
Hnf4aP49698 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Hnf4aP49698 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.69□□□□□ -0.38
Hnf4aP49698 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hnf4aP49698 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hnf4aP49698 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hnf4aP49698 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hnf4aP49698 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hnf4aP49698 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.69□□□□□ -0.38
Hnf4aP49698 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Hnf4aP49698 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hnf4aP49698 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hnf4aP49698 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Hnf4aP49698 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hnf4aP49698 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hnf4aP49698 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hnf4aP49698 Gm45668-201ENSMUST00000211271 493 ntBASIC12.69□□□□□ -0.38
Hnf4aP49698 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.69□□□□□ -0.38
Hnf4aP49698 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.69□□□□□ -0.38
Hnf4aP49698 Itm2b-204ENSMUST00000228637 783 ntBASIC12.69□□□□□ -0.38
Hnf4aP49698 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hnf4aP49698 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hnf4aP49698 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hnf4aP49698 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hnf4aP49698 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Hnf4aP49698 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Hnf4aP49698 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Hnf4aP49698 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hnf4aP49698 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.69□□□□□ -0.38
Hnf4aP49698 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hnf4aP49698 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hnf4aP49698 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.69□□□□□ -0.38
Hnf4aP49698 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hnf4aP49698 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Hnf4aP49698 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hnf4aP49698 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hnf4aP49698 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hnf4aP49698 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hnf4aP49698 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.69□□□□□ -0.38
Hnf4aP49698 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Hnf4aP49698 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms