Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gm5161-201ENSMUST00000075243 853 ntBASIC11.85□□□□□ -0.51
Rfx3P48381 Gm24447-201ENSMUST00000083977 338 ntBASIC11.85□□□□□ -0.51
Rfx3P48381 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.85□□□□□ -0.51
Rfx3P48381 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfx3P48381 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Rfx3P48381 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfx3P48381 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfx3P48381 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfx3P48381 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rfx3P48381 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfx3P48381 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfx3P48381 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rfx3P48381 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfx3P48381 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.85□□□□□ -0.51
Rfx3P48381 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfx3P48381 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfx3P48381 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfx3P48381 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rfx3P48381 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rfx3P48381 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rfx3P48381 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.84□□□□□ -0.51
Rfx3P48381 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rfx3P48381 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rfx3P48381 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rfx3P48381 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rfx3P48381 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rfx3P48381 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rfx3P48381 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rfx3P48381 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rfx3P48381 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rfx3P48381 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Rfx3P48381 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.84□□□□□ -0.51
Rfx3P48381 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rfx3P48381 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.84□□□□□ -0.51
Rfx3P48381 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rfx3P48381 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rfx3P48381 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.84□□□□□ -0.51
Rfx3P48381 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rfx3P48381 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rfx3P48381 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Rfx3P48381 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Rfx3P48381 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.84□□□□□ -0.51
Rfx3P48381 Gm15321-201ENSMUST00000121290 288 ntBASIC11.84□□□□□ -0.51
Rfx3P48381 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.84□□□□□ -0.51
Rfx3P48381 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rfx3P48381 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Rfx3P48381 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Rfx3P48381 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rfx3P48381 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.84□□□□□ -0.51
Rfx3P48381 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rfx3P48381 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Rfx3P48381 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.84□□□□□ -0.51
Rfx3P48381 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rfx3P48381 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rfx3P48381 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rfx3P48381 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rfx3P48381 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rfx3P48381 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rfx3P48381 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rfx3P48381 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rfx3P48381 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rfx3P48381 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rfx3P48381 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Rfx3P48381 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rfx3P48381 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rfx3P48381 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rfx3P48381 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rfx3P48381 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Rfx3P48381 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rfx3P48381 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rfx3P48381 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rfx3P48381 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rfx3P48381 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Rfx3P48381 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Rfx3P48381 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Rfx3P48381 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Rfx3P48381 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.83□□□□□ -0.51
Rfx3P48381 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Rfx3P48381 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rfx3P48381 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.83□□□□□ -0.52
Rfx3P48381 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rfx3P48381 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Rfx3P48381 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Rfx3P48381 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rfx3P48381 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rfx3P48381 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rfx3P48381 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rfx3P48381 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC11.83□□□□□ -0.52
Rfx3P48381 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.83□□□□□ -0.52
Rfx3P48381 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Rfx3P48381 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rfx3P48381 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rfx3P48381 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rfx3P48381 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Rfx3P48381 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.83□□□□□ -0.52
Rfx3P48381 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.83□□□□□ -0.52
Rfx3P48381 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.83□□□□□ -0.52
Rfx3P48381 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.83□□□□□ -0.52
Rfx3P48381 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC11.83□□□□□ -0.52
Rfx3P48381 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms