Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CYP3A4P08684 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CYP3A4P08684 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CYP3A4P08684 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CYP3A4P08684 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.02■□□□□ 0.48
CYP3A4P08684 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CYP3A4P08684 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.02■□□□□ 0.48
CYP3A4P08684 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.02■□□□□ 0.48
CYP3A4P08684 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CYP3A4P08684 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.02■□□□□ 0.48
CYP3A4P08684 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.02■□□□□ 0.48
CYP3A4P08684 AC104794.3-201ENST00000566840 1248 ntBASIC18.02■□□□□ 0.48
CYP3A4P08684 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CYP3A4P08684 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CYP3A4P08684 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.02■□□□□ 0.47
CYP3A4P08684 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.02■□□□□ 0.47
CYP3A4P08684 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CYP3A4P08684 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.02■□□□□ 0.47
CYP3A4P08684 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CYP3A4P08684 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CYP3A4P08684 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.02■□□□□ 0.47
CYP3A4P08684 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CYP3A4P08684 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CYP3A4P08684 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CYP3A4P08684 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CYP3A4P08684 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CYP3A4P08684 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CYP3A4P08684 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CYP3A4P08684 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CYP3A4P08684 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.01■□□□□ 0.47
CYP3A4P08684 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CYP3A4P08684 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
CYP3A4P08684 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.01■□□□□ 0.47
CYP3A4P08684 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CYP3A4P08684 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18.01■□□□□ 0.47
CYP3A4P08684 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CYP3A4P08684 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CYP3A4P08684 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CYP3A4P08684 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CYP3A4P08684 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18.01■□□□□ 0.47
CYP3A4P08684 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CYP3A4P08684 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CYP3A4P08684 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.01■□□□□ 0.47
CYP3A4P08684 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.01■□□□□ 0.47
CYP3A4P08684 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.01■□□□□ 0.47
CYP3A4P08684 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CYP3A4P08684 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CYP3A4P08684 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CYP3A4P08684 MIR4313-201ENST00000580760 101 ntBASIC18.01■□□□□ 0.47
CYP3A4P08684 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CYP3A4P08684 LINC01115-203ENST00000606068 577 ntBASIC18.01■□□□□ 0.47
CYP3A4P08684 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CYP3A4P08684 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CYP3A4P08684 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.01■□□□□ 0.47
CYP3A4P08684 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC18.01■□□□□ 0.47
CYP3A4P08684 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
CYP3A4P08684 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CYP3A4P08684 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
CYP3A4P08684 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CYP3A4P08684 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.01■□□□□ 0.47
CYP3A4P08684 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CYP3A4P08684 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.01■□□□□ 0.47
CYP3A4P08684 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.01■□□□□ 0.47
CYP3A4P08684 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CYP3A4P08684 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18■□□□□ 0.47
CYP3A4P08684 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CYP3A4P08684 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18■□□□□ 0.47
CYP3A4P08684 AL607033.1-201ENST00000623900 1599 ntBASIC18■□□□□ 0.47
CYP3A4P08684 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CYP3A4P08684 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CYP3A4P08684 SUPT20HL2-201ENST00000486479 2409 ntBASIC18■□□□□ 0.47
CYP3A4P08684 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CYP3A4P08684 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CYP3A4P08684 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18■□□□□ 0.47
CYP3A4P08684 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18■□□□□ 0.47
CYP3A4P08684 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC18■□□□□ 0.47
CYP3A4P08684 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18■□□□□ 0.47
CYP3A4P08684 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CYP3A4P08684 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CYP3A4P08684 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18■□□□□ 0.47
CYP3A4P08684 CALY-202ENST00000368555 783 ntTSL 2 BASIC18■□□□□ 0.47
CYP3A4P08684 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18■□□□□ 0.47
CYP3A4P08684 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18■□□□□ 0.47
CYP3A4P08684 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18■□□□□ 0.47
CYP3A4P08684 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18■□□□□ 0.47
CYP3A4P08684 AL589987.1-201ENST00000453380 819 ntBASIC18■□□□□ 0.47
CYP3A4P08684 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18■□□□□ 0.47
CYP3A4P08684 DOC2GP-202ENST00000514950 1163 ntBASIC18■□□□□ 0.47
CYP3A4P08684 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18■□□□□ 0.47
CYP3A4P08684 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18■□□□□ 0.47
CYP3A4P08684 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18■□□□□ 0.47
CYP3A4P08684 LINC02084-201ENST00000606069 1096 ntBASIC18■□□□□ 0.47
CYP3A4P08684 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18■□□□□ 0.47
CYP3A4P08684 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18■□□□□ 0.47
CYP3A4P08684 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
CYP3A4P08684 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18■□□□□ 0.47
CYP3A4P08684 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CYP3A4P08684 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CYP3A4P08684 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18■□□□□ 0.47
CYP3A4P08684 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms