Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Gm8602-201ENSMUST00000184045 607 ntBASIC11.09□□□□□ -0.63
Cpsf4lE9Q2N0 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Cpsf4lE9Q2N0 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cpsf4lE9Q2N0 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cpsf4lE9Q2N0 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cpsf4lE9Q2N0 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cpsf4lE9Q2N0 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cpsf4lE9Q2N0 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.09□□□□□ -0.63
Cpsf4lE9Q2N0 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cpsf4lE9Q2N0 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.09□□□□□ -0.63
Cpsf4lE9Q2N0 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Cpsf4lE9Q2N0 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cpsf4lE9Q2N0 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.08□□□□□ -0.63
Cpsf4lE9Q2N0 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Gm27331-201ENSMUST00000183705 60 ntBASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Gm37497-201ENSMUST00000195830 798 ntBASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cpsf4lE9Q2N0 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cpsf4lE9Q2N0 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.07□□□□□ -0.64
Cpsf4lE9Q2N0 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cpsf4lE9Q2N0 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.07□□□□□ -0.64
Cpsf4lE9Q2N0 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cpsf4lE9Q2N0 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.07□□□□□ -0.64
Cpsf4lE9Q2N0 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cpsf4lE9Q2N0 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cpsf4lE9Q2N0 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cpsf4lE9Q2N0 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cpsf4lE9Q2N0 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.07□□□□□ -0.64
Cpsf4lE9Q2N0 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cpsf4lE9Q2N0 Mir686-201ENSMUST00000102174 109 ntBASIC11.07□□□□□ -0.64
Cpsf4lE9Q2N0 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.07□□□□□ -0.64
Cpsf4lE9Q2N0 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.07□□□□□ -0.64
Cpsf4lE9Q2N0 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cpsf4lE9Q2N0 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.07□□□□□ -0.64
Cpsf4lE9Q2N0 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cpsf4lE9Q2N0 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.07□□□□□ -0.64
Cpsf4lE9Q2N0 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cpsf4lE9Q2N0 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.07□□□□□ -0.64
Cpsf4lE9Q2N0 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cpsf4lE9Q2N0 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.07□□□□□ -0.64
Cpsf4lE9Q2N0 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cpsf4lE9Q2N0 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.07□□□□□ -0.64
Cpsf4lE9Q2N0 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Cpsf4lE9Q2N0 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cpsf4lE9Q2N0 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cpsf4lE9Q2N0 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cpsf4lE9Q2N0 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cpsf4lE9Q2N0 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cpsf4lE9Q2N0 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.07□□□□□ -0.64
Cpsf4lE9Q2N0 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Cpsf4lE9Q2N0 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cpsf4lE9Q2N0 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms