Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 AL645939.2-201ENST00000427340 991 ntBASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 AL079307.3-201ENST00000556114 283 ntBASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 KRT8P37-201ENST00000451609 1420 ntBASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHA4Q9UN74 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.54
PCDHA4Q9UN74 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
PCDHA4Q9UN74 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PCDHA4Q9UN74 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PCDHA4Q9UN74 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDHA4Q9UN74 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHA4Q9UN74 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHA4Q9UN74 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHA4Q9UN74 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHA4Q9UN74 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.39■□□□□ 0.53
PCDHA4Q9UN74 AC107890.1-201ENST00000422478 521 ntBASIC18.39■□□□□ 0.53
PCDHA4Q9UN74 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHA4Q9UN74 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHA4Q9UN74 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PCDHA4Q9UN74 AC140878.1-201ENST00000565277 250 ntBASIC18.39■□□□□ 0.53
PCDHA4Q9UN74 AL589739.1-201ENST00000607720 493 ntBASIC18.39■□□□□ 0.53
PCDHA4Q9UN74 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PCDHA4Q9UN74 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHA4Q9UN74 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHA4Q9UN74 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHA4Q9UN74 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.39■□□□□ 0.53
PCDHA4Q9UN74 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHA4Q9UN74 REXO1L1P-202ENST00000608646 1974 ntBASIC18.39■□□□□ 0.53
PCDHA4Q9UN74 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDHA4Q9UN74 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHA4Q9UN74 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHA4Q9UN74 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHA4Q9UN74 CETN4P-206ENST00000642099 2168 ntBASIC18.38■□□□□ 0.53
PCDHA4Q9UN74 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHA4Q9UN74 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHA4Q9UN74 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDHA4Q9UN74 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHA4Q9UN74 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PCDHA4Q9UN74 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHA4Q9UN74 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.38■□□□□ 0.53
PCDHA4Q9UN74 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.38■□□□□ 0.53
PCDHA4Q9UN74 PMS2P2-201ENST00000425039 1128 ntBASIC18.38■□□□□ 0.53
PCDHA4Q9UN74 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.38■□□□□ 0.53
PCDHA4Q9UN74 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHA4Q9UN74 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.38■□□□□ 0.53
PCDHA4Q9UN74 SPDYE12P-201ENST00000618416 771 ntBASIC18.38■□□□□ 0.53
PCDHA4Q9UN74 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHA4Q9UN74 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHA4Q9UN74 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHA4Q9UN74 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PCDHA4Q9UN74 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PCDHA4Q9UN74 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHA4Q9UN74 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
PCDHA4Q9UN74 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHA4Q9UN74 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHA4Q9UN74 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHA4Q9UN74 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHA4Q9UN74 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
PCDHA4Q9UN74 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHA4Q9UN74 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDHA4Q9UN74 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHA4Q9UN74 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHA4Q9UN74 AC008894.3-201ENST00000624324 3103 ntBASIC18.37■□□□□ 0.53
PCDHA4Q9UN74 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHA4Q9UN74 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.37■□□□□ 0.53
PCDHA4Q9UN74 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHA4Q9UN74 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
PCDHA4Q9UN74 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHA4Q9UN74 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.37■□□□□ 0.53
PCDHA4Q9UN74 AL080243.2-201ENST00000418783 582 ntBASIC18.37■□□□□ 0.53
PCDHA4Q9UN74 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHA4Q9UN74 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHA4Q9UN74 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
PCDHA4Q9UN74 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.37■□□□□ 0.53
PCDHA4Q9UN74 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms