Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ndc1Q8VCB1 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ndc1Q8VCB1 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.4□□□□□ -0.42
Ndc1Q8VCB1 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Ndc1Q8VCB1 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Ndc1Q8VCB1 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ndc1Q8VCB1 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ndc1Q8VCB1 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ndc1Q8VCB1 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ndc1Q8VCB1 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ndc1Q8VCB1 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ndc1Q8VCB1 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ndc1Q8VCB1 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ndc1Q8VCB1 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ndc1Q8VCB1 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.39□□□□□ -0.43
Ndc1Q8VCB1 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ndc1Q8VCB1 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ndc1Q8VCB1 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ndc1Q8VCB1 Gm23931-201ENSMUST00000103842 109 ntBASIC12.39□□□□□ -0.43
Ndc1Q8VCB1 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ndc1Q8VCB1 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ndc1Q8VCB1 Gm5187-201ENSMUST00000117317 991 ntBASIC12.39□□□□□ -0.43
Ndc1Q8VCB1 Gm11618-201ENSMUST00000117946 267 ntBASIC12.39□□□□□ -0.43
Ndc1Q8VCB1 Gm1335-201ENSMUST00000121653 386 ntBASIC12.39□□□□□ -0.43
Ndc1Q8VCB1 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ndc1Q8VCB1 Gm37922-201ENSMUST00000195596 455 ntBASIC12.39□□□□□ -0.43
Ndc1Q8VCB1 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ndc1Q8VCB1 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.39□□□□□ -0.43
Ndc1Q8VCB1 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
Ndc1Q8VCB1 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.39□□□□□ -0.43
Ndc1Q8VCB1 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.39□□□□□ -0.43
Ndc1Q8VCB1 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ndc1Q8VCB1 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ndc1Q8VCB1 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ndc1Q8VCB1 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ndc1Q8VCB1 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ndc1Q8VCB1 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ndc1Q8VCB1 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ndc1Q8VCB1 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ndc1Q8VCB1 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.39□□□□□ -0.43
Ndc1Q8VCB1 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ndc1Q8VCB1 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ndc1Q8VCB1 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ndc1Q8VCB1 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ndc1Q8VCB1 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.39□□□□□ -0.43
Ndc1Q8VCB1 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ndc1Q8VCB1 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ndc1Q8VCB1 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Ndc1Q8VCB1 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Ndc1Q8VCB1 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ndc1Q8VCB1 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ndc1Q8VCB1 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ndc1Q8VCB1 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ndc1Q8VCB1 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ndc1Q8VCB1 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ndc1Q8VCB1 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ndc1Q8VCB1 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ndc1Q8VCB1 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ndc1Q8VCB1 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Ndc1Q8VCB1 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ndc1Q8VCB1 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ndc1Q8VCB1 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Ndc1Q8VCB1 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ndc1Q8VCB1 Gm27514-201ENSMUST00000183692 110 ntBASIC12.38□□□□□ -0.43
Ndc1Q8VCB1 Gm27682-201ENSMUST00000183930 110 ntBASIC12.38□□□□□ -0.43
Ndc1Q8VCB1 Mir6420-201ENSMUST00000185032 102 ntBASIC12.38□□□□□ -0.43
Ndc1Q8VCB1 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.38□□□□□ -0.43
Ndc1Q8VCB1 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.38□□□□□ -0.43
Ndc1Q8VCB1 Gm45331-201ENSMUST00000209868 554 ntBASIC12.38□□□□□ -0.43
Ndc1Q8VCB1 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.38□□□□□ -0.43
Ndc1Q8VCB1 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ndc1Q8VCB1 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ndc1Q8VCB1 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ndc1Q8VCB1 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ndc1Q8VCB1 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.38□□□□□ -0.43
Ndc1Q8VCB1 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ndc1Q8VCB1 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ndc1Q8VCB1 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ndc1Q8VCB1 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ndc1Q8VCB1 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Ndc1Q8VCB1 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ndc1Q8VCB1 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ndc1Q8VCB1 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ndc1Q8VCB1 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ndc1Q8VCB1 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ndc1Q8VCB1 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Ndc1Q8VCB1 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Ndc1Q8VCB1 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ndc1Q8VCB1 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms