Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Rfwd3Q8CIK8 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rfwd3Q8CIK8 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.37□□□□□ -0.43
Rfwd3Q8CIK8 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rfwd3Q8CIK8 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rfwd3Q8CIK8 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rfwd3Q8CIK8 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rfwd3Q8CIK8 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rfwd3Q8CIK8 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.37□□□□□ -0.43
Rfwd3Q8CIK8 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rfwd3Q8CIK8 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rfwd3Q8CIK8 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Rfwd3Q8CIK8 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfwd3Q8CIK8 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfwd3Q8CIK8 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfwd3Q8CIK8 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rfwd3Q8CIK8 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfwd3Q8CIK8 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rfwd3Q8CIK8 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.36□□□□□ -0.43
Rfwd3Q8CIK8 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfwd3Q8CIK8 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfwd3Q8CIK8 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Rfwd3Q8CIK8 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfwd3Q8CIK8 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Rfwd3Q8CIK8 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfwd3Q8CIK8 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfwd3Q8CIK8 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rfwd3Q8CIK8 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfwd3Q8CIK8 Gm13612-201ENSMUST00000119276 390 ntBASIC12.36□□□□□ -0.43
Rfwd3Q8CIK8 Mir1894-201ENSMUST00000122802 81 ntBASIC12.36□□□□□ -0.43
Rfwd3Q8CIK8 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rfwd3Q8CIK8 Gm6152-201ENSMUST00000151704 340 ntBASIC12.36□□□□□ -0.43
Rfwd3Q8CIK8 Gm6244-201ENSMUST00000178732 841 ntBASIC12.36□□□□□ -0.43
Rfwd3Q8CIK8 Gm27892-201ENSMUST00000185017 106 ntBASIC12.36□□□□□ -0.43
Rfwd3Q8CIK8 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfwd3Q8CIK8 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.36□□□□□ -0.43
Rfwd3Q8CIK8 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfwd3Q8CIK8 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfwd3Q8CIK8 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfwd3Q8CIK8 Gm5356-201ENSMUST00000093326 615 ntBASIC12.36□□□□□ -0.43
Rfwd3Q8CIK8 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.36□□□□□ -0.43
Rfwd3Q8CIK8 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfwd3Q8CIK8 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfwd3Q8CIK8 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfwd3Q8CIK8 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfwd3Q8CIK8 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.36□□□□□ -0.43
Rfwd3Q8CIK8 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfwd3Q8CIK8 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfwd3Q8CIK8 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfwd3Q8CIK8 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfwd3Q8CIK8 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfwd3Q8CIK8 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.35□□□□□ -0.43
Rfwd3Q8CIK8 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rfwd3Q8CIK8 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rfwd3Q8CIK8 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfwd3Q8CIK8 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfwd3Q8CIK8 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.35□□□□□ -0.43
Rfwd3Q8CIK8 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Rfwd3Q8CIK8 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rfwd3Q8CIK8 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfwd3Q8CIK8 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfwd3Q8CIK8 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfwd3Q8CIK8 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfwd3Q8CIK8 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfwd3Q8CIK8 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.35□□□□□ -0.43
Rfwd3Q8CIK8 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rfwd3Q8CIK8 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.35□□□□□ -0.43
Rfwd3Q8CIK8 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfwd3Q8CIK8 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.35□□□□□ -0.43
Rfwd3Q8CIK8 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfwd3Q8CIK8 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rfwd3Q8CIK8 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rfwd3Q8CIK8 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfwd3Q8CIK8 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Rfwd3Q8CIK8 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.35□□□□□ -0.43
Rfwd3Q8CIK8 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfwd3Q8CIK8 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfwd3Q8CIK8 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfwd3Q8CIK8 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rfwd3Q8CIK8 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfwd3Q8CIK8 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfwd3Q8CIK8 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rfwd3Q8CIK8 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rfwd3Q8CIK8 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfwd3Q8CIK8 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfwd3Q8CIK8 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rfwd3Q8CIK8 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rfwd3Q8CIK8 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfwd3Q8CIK8 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfwd3Q8CIK8 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rfwd3Q8CIK8 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rfwd3Q8CIK8 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfwd3Q8CIK8 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfwd3Q8CIK8 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfwd3Q8CIK8 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rfwd3Q8CIK8 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rfwd3Q8CIK8 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rfwd3Q8CIK8 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rfwd3Q8CIK8 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.34□□□□□ -0.43
Rfwd3Q8CIK8 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms