Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.66□□□□□ -0.38
Sdc3Q64519 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sdc3Q64519 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Sdc3Q64519 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.65□□□□□ -0.38
Sdc3Q64519 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sdc3Q64519 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.65□□□□□ -0.38
Sdc3Q64519 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Sdc3Q64519 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sdc3Q64519 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sdc3Q64519 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Sdc3Q64519 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sdc3Q64519 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sdc3Q64519 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.65□□□□□ -0.38
Sdc3Q64519 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sdc3Q64519 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Sdc3Q64519 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sdc3Q64519 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sdc3Q64519 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sdc3Q64519 Gm24644-201ENSMUST00000157114 139 ntBASIC12.65□□□□□ -0.38
Sdc3Q64519 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sdc3Q64519 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sdc3Q64519 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sdc3Q64519 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.65□□□□□ -0.38
Sdc3Q64519 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.65□□□□□ -0.38
Sdc3Q64519 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.65□□□□□ -0.38
Sdc3Q64519 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.65□□□□□ -0.38
Sdc3Q64519 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Sdc3Q64519 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sdc3Q64519 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.65□□□□□ -0.38
Sdc3Q64519 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.65□□□□□ -0.38
Sdc3Q64519 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sdc3Q64519 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sdc3Q64519 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sdc3Q64519 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Sdc3Q64519 Gm10012-201ENSMUST00000078252 192 ntBASIC12.65□□□□□ -0.38
Sdc3Q64519 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Sdc3Q64519 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sdc3Q64519 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sdc3Q64519 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sdc3Q64519 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sdc3Q64519 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sdc3Q64519 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sdc3Q64519 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.65□□□□□ -0.38
Sdc3Q64519 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sdc3Q64519 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sdc3Q64519 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Sdc3Q64519 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Sdc3Q64519 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sdc3Q64519 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sdc3Q64519 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sdc3Q64519 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sdc3Q64519 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sdc3Q64519 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sdc3Q64519 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sdc3Q64519 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Sdc3Q64519 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sdc3Q64519 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sdc3Q64519 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sdc3Q64519 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sdc3Q64519 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sdc3Q64519 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sdc3Q64519 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sdc3Q64519 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sdc3Q64519 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.64□□□□□ -0.39
Sdc3Q64519 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sdc3Q64519 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sdc3Q64519 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sdc3Q64519 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sdc3Q64519 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Sdc3Q64519 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sdc3Q64519 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Sdc3Q64519 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.64□□□□□ -0.39
Sdc3Q64519 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.64□□□□□ -0.39
Sdc3Q64519 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sdc3Q64519 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Sdc3Q64519 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sdc3Q64519 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sdc3Q64519 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sdc3Q64519 Gm24196-201ENSMUST00000179161 110 ntBASIC12.64□□□□□ -0.39
Sdc3Q64519 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sdc3Q64519 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sdc3Q64519 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.64□□□□□ -0.39
Sdc3Q64519 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sdc3Q64519 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sdc3Q64519 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Sdc3Q64519 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sdc3Q64519 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sdc3Q64519 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sdc3Q64519 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sdc3Q64519 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sdc3Q64519 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Sdc3Q64519 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sdc3Q64519 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sdc3Q64519 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sdc3Q64519 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sdc3Q64519 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sdc3Q64519 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sdc3Q64519 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sdc3Q64519 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sdc3Q64519 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms