Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.5□□□□□ -0.25
Syn1O88935 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Syn1O88935 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syn1O88935 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
Syn1O88935 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syn1O88935 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Syn1O88935 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Syn1O88935 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syn1O88935 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Syn1O88935 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syn1O88935 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Syn1O88935 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Syn1O88935 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syn1O88935 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syn1O88935 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Syn1O88935 Gm6447-201ENSMUST00000118905 835 ntBASIC13.49□□□□□ -0.25
Syn1O88935 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.49□□□□□ -0.25
Syn1O88935 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Syn1O88935 Gm17208-201ENSMUST00000168388 535 ntBASIC13.49□□□□□ -0.25
Syn1O88935 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.49□□□□□ -0.25
Syn1O88935 Gm3096-201ENSMUST00000185770 364 ntBASIC13.49□□□□□ -0.25
Syn1O88935 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC13.49□□□□□ -0.25
Syn1O88935 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Syn1O88935 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Syn1O88935 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Syn1O88935 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syn1O88935 CT025551.1-201ENSMUST00000223996 692 ntBASIC13.49□□□□□ -0.25
Syn1O88935 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Syn1O88935 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syn1O88935 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syn1O88935 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syn1O88935 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syn1O88935 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Syn1O88935 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syn1O88935 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Syn1O88935 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.49□□□□□ -0.25
Syn1O88935 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Syn1O88935 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Syn1O88935 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Syn1O88935 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syn1O88935 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syn1O88935 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syn1O88935 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syn1O88935 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Syn1O88935 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syn1O88935 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syn1O88935 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.48□□□□□ -0.25
Syn1O88935 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Syn1O88935 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Syn1O88935 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Syn1O88935 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syn1O88935 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Syn1O88935 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syn1O88935 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syn1O88935 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Syn1O88935 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syn1O88935 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.48□□□□□ -0.25
Syn1O88935 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.48□□□□□ -0.25
Syn1O88935 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.48□□□□□ -0.25
Syn1O88935 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syn1O88935 Gm9062-201ENSMUST00000117712 727 ntBASIC13.48□□□□□ -0.25
Syn1O88935 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Syn1O88935 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syn1O88935 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.48□□□□□ -0.25
Syn1O88935 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13.48□□□□□ -0.25
Syn1O88935 Gm44551-201ENSMUST00000208804 171 ntBASIC13.48□□□□□ -0.25
Syn1O88935 AC123665.1-201ENSMUST00000228204 438 ntBASIC13.48□□□□□ -0.25
Syn1O88935 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syn1O88935 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.48□□□□□ -0.25
Syn1O88935 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syn1O88935 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Syn1O88935 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Syn1O88935 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.48□□□□□ -0.25
Syn1O88935 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syn1O88935 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Syn1O88935 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syn1O88935 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Syn1O88935 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Syn1O88935 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Syn1O88935 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syn1O88935 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syn1O88935 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syn1O88935 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syn1O88935 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syn1O88935 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syn1O88935 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.47□□□□□ -0.25
Syn1O88935 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Syn1O88935 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syn1O88935 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syn1O88935 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Syn1O88935 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syn1O88935 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Syn1O88935 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syn1O88935 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Syn1O88935 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Syn1O88935 Gm11667-201ENSMUST00000119828 486 ntBASIC13.47□□□□□ -0.25
Syn1O88935 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.47□□□□□ -0.25
Syn1O88935 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Syn1O88935 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.47□□□□□ -0.25
Syn1O88935 Gm27552-201ENSMUST00000183351 62 ntBASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms