Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC18.11■□□□□ 0.49
Hfm1D3Z4R1 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC18.11■□□□□ 0.49
Hfm1D3Z4R1 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC18.11■□□□□ 0.49
Hfm1D3Z4R1 Gm42937-201ENSMUST00000197360 752 ntBASIC18.11■□□□□ 0.49
Hfm1D3Z4R1 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hfm1D3Z4R1 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hfm1D3Z4R1 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Hfm1D3Z4R1 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hfm1D3Z4R1 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hfm1D3Z4R1 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Hfm1D3Z4R1 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Hfm1D3Z4R1 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hfm1D3Z4R1 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hfm1D3Z4R1 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Hfm1D3Z4R1 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Hfm1D3Z4R1 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hfm1D3Z4R1 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC18.11■□□□□ 0.49
Hfm1D3Z4R1 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hfm1D3Z4R1 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC18.11■□□□□ 0.49
Hfm1D3Z4R1 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hfm1D3Z4R1 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hfm1D3Z4R1 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Hfm1D3Z4R1 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hfm1D3Z4R1 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hfm1D3Z4R1 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hfm1D3Z4R1 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hfm1D3Z4R1 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hfm1D3Z4R1 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC18.1■□□□□ 0.49
Hfm1D3Z4R1 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC18.1■□□□□ 0.49
Hfm1D3Z4R1 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC18.1■□□□□ 0.49
Hfm1D3Z4R1 H2-Q3-201ENSMUST00000172583 608 ntBASIC18.1■□□□□ 0.49
Hfm1D3Z4R1 Gm28071-201ENSMUST00000190355 478 ntBASIC18.1■□□□□ 0.49
Hfm1D3Z4R1 Gm44094-201ENSMUST00000204703 2030 ntBASIC18.1■□□□□ 0.49
Hfm1D3Z4R1 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC18.1■□□□□ 0.49
Hfm1D3Z4R1 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hfm1D3Z4R1 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hfm1D3Z4R1 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Hfm1D3Z4R1 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hfm1D3Z4R1 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hfm1D3Z4R1 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC18.1■□□□□ 0.49
Hfm1D3Z4R1 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hfm1D3Z4R1 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hfm1D3Z4R1 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
Hfm1D3Z4R1 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Hfm1D3Z4R1 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hfm1D3Z4R1 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hfm1D3Z4R1 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hfm1D3Z4R1 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Hfm1D3Z4R1 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hfm1D3Z4R1 Gm6580-201ENSMUST00000117504 1357 ntBASIC18.1■□□□□ 0.49
Hfm1D3Z4R1 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hfm1D3Z4R1 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Hfm1D3Z4R1 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC18.09■□□□□ 0.49
Hfm1D3Z4R1 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hfm1D3Z4R1 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Hfm1D3Z4R1 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Hfm1D3Z4R1 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC18.09■□□□□ 0.49
Hfm1D3Z4R1 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Hfm1D3Z4R1 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Hfm1D3Z4R1 Gm8365-201ENSMUST00000197334 648 ntBASIC18.09■□□□□ 0.49
Hfm1D3Z4R1 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC18.09■□□□□ 0.49
Hfm1D3Z4R1 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC18.09■□□□□ 0.49
Hfm1D3Z4R1 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hfm1D3Z4R1 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hfm1D3Z4R1 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hfm1D3Z4R1 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hfm1D3Z4R1 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hfm1D3Z4R1 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hfm1D3Z4R1 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hfm1D3Z4R1 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hfm1D3Z4R1 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hfm1D3Z4R1 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hfm1D3Z4R1 Gm43134-201ENSMUST00000199434 1886 ntBASIC18.09■□□□□ 0.49
Hfm1D3Z4R1 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hfm1D3Z4R1 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC18.09■□□□□ 0.49
Hfm1D3Z4R1 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Hfm1D3Z4R1 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.09■□□□□ 0.49
Hfm1D3Z4R1 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hfm1D3Z4R1 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hfm1D3Z4R1 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hfm1D3Z4R1 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hfm1D3Z4R1 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hfm1D3Z4R1 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hfm1D3Z4R1 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC18.08■□□□□ 0.49
Hfm1D3Z4R1 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Hfm1D3Z4R1 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Hfm1D3Z4R1 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Hfm1D3Z4R1 Gm7600-201ENSMUST00000209657 785 ntBASIC18.08■□□□□ 0.49
Hfm1D3Z4R1 CT009713.8-201ENSMUST00000225448 560 ntBASIC18.08■□□□□ 0.49
Hfm1D3Z4R1 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hfm1D3Z4R1 Mir219a-1-201ENSMUST00000083621 110 ntBASIC18.08■□□□□ 0.49
Hfm1D3Z4R1 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Hfm1D3Z4R1 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hfm1D3Z4R1 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hfm1D3Z4R1 Ptprs-211ENSMUST00000223859 5588 ntBASIC18.08■□□□□ 0.48
Hfm1D3Z4R1 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Hfm1D3Z4R1 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Hfm1D3Z4R1 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hfm1D3Z4R1 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hfm1D3Z4R1 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms