Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.79□□□□□ -0.36
Clip3B9EHT4 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clip3B9EHT4 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Clip3B9EHT4 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clip3B9EHT4 Gm24447-201ENSMUST00000083977 338 ntBASIC12.79□□□□□ -0.36
Clip3B9EHT4 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clip3B9EHT4 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clip3B9EHT4 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clip3B9EHT4 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clip3B9EHT4 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.79□□□□□ -0.36
Clip3B9EHT4 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clip3B9EHT4 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.79□□□□□ -0.36
Clip3B9EHT4 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clip3B9EHT4 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clip3B9EHT4 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clip3B9EHT4 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clip3B9EHT4 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clip3B9EHT4 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Clip3B9EHT4 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.79□□□□□ -0.36
Clip3B9EHT4 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clip3B9EHT4 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.79□□□□□ -0.36
Clip3B9EHT4 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clip3B9EHT4 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clip3B9EHT4 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Clip3B9EHT4 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clip3B9EHT4 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Clip3B9EHT4 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clip3B9EHT4 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clip3B9EHT4 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Clip3B9EHT4 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clip3B9EHT4 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Clip3B9EHT4 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clip3B9EHT4 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clip3B9EHT4 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clip3B9EHT4 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clip3B9EHT4 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clip3B9EHT4 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.78□□□□□ -0.36
Clip3B9EHT4 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clip3B9EHT4 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clip3B9EHT4 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clip3B9EHT4 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clip3B9EHT4 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Clip3B9EHT4 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Clip3B9EHT4 Gm29608-201ENSMUST00000190444 463 ntBASIC12.78□□□□□ -0.36
Clip3B9EHT4 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clip3B9EHT4 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.78□□□□□ -0.36
Clip3B9EHT4 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clip3B9EHT4 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clip3B9EHT4 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clip3B9EHT4 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clip3B9EHT4 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clip3B9EHT4 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clip3B9EHT4 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clip3B9EHT4 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.78□□□□□ -0.36
Clip3B9EHT4 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clip3B9EHT4 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clip3B9EHT4 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clip3B9EHT4 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clip3B9EHT4 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Clip3B9EHT4 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clip3B9EHT4 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Clip3B9EHT4 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.78□□□□□ -0.36
Clip3B9EHT4 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.78□□□□□ -0.36
Clip3B9EHT4 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clip3B9EHT4 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
Clip3B9EHT4 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clip3B9EHT4 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clip3B9EHT4 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clip3B9EHT4 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Clip3B9EHT4 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.77□□□□□ -0.36
Clip3B9EHT4 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clip3B9EHT4 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clip3B9EHT4 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Clip3B9EHT4 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clip3B9EHT4 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.77□□□□□ -0.36
Clip3B9EHT4 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clip3B9EHT4 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Clip3B9EHT4 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clip3B9EHT4 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clip3B9EHT4 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clip3B9EHT4 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clip3B9EHT4 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clip3B9EHT4 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.77□□□□□ -0.37
Clip3B9EHT4 Gm11425-201ENSMUST00000119608 498 ntBASIC12.77□□□□□ -0.37
Clip3B9EHT4 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clip3B9EHT4 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Clip3B9EHT4 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.77□□□□□ -0.37
Clip3B9EHT4 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Clip3B9EHT4 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Clip3B9EHT4 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Clip3B9EHT4 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.77□□□□□ -0.37
Clip3B9EHT4 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.77□□□□□ -0.37
Clip3B9EHT4 Gm7287-201ENSMUST00000205267 602 ntBASIC12.77□□□□□ -0.37
Clip3B9EHT4 Gm8463-201ENSMUST00000208573 613 ntBASIC12.77□□□□□ -0.37
Clip3B9EHT4 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.77□□□□□ -0.37
Clip3B9EHT4 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clip3B9EHT4 Gm9396-201ENSMUST00000076703 567 ntBASIC12.77□□□□□ -0.37
Clip3B9EHT4 Gm37648-201ENSMUST00000192072 2563 ntBASIC12.77□□□□□ -0.37
Clip3B9EHT4 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clip3B9EHT4 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms