Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa1Q8VEE4 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa1Q8VEE4 Gm12428-201ENSMUST00000119844 727 ntBASIC13.28□□□□□ -0.28
Rpa1Q8VEE4 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.28□□□□□ -0.28
Rpa1Q8VEE4 Gm9824-201ENSMUST00000178707 561 ntBASIC13.28□□□□□ -0.28
Rpa1Q8VEE4 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.28□□□□□ -0.28
Rpa1Q8VEE4 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.28□□□□□ -0.28
Rpa1Q8VEE4 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa1Q8VEE4 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.28□□□□□ -0.28
Rpa1Q8VEE4 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.28□□□□□ -0.28
Rpa1Q8VEE4 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa1Q8VEE4 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa1Q8VEE4 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa1Q8VEE4 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa1Q8VEE4 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa1Q8VEE4 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Rpa1Q8VEE4 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Rpa1Q8VEE4 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa1Q8VEE4 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa1Q8VEE4 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Rpa1Q8VEE4 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa1Q8VEE4 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa1Q8VEE4 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa1Q8VEE4 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa1Q8VEE4 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa1Q8VEE4 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa1Q8VEE4 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Rpa1Q8VEE4 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rpa1Q8VEE4 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rpa1Q8VEE4 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rpa1Q8VEE4 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.27□□□□□ -0.28
Rpa1Q8VEE4 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.27□□□□□ -0.28
Rpa1Q8VEE4 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Rpa1Q8VEE4 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rpa1Q8VEE4 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpa1Q8VEE4 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.27□□□□□ -0.29
Rpa1Q8VEE4 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpa1Q8VEE4 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.27□□□□□ -0.29
Rpa1Q8VEE4 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Rpa1Q8VEE4 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpa1Q8VEE4 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Rpa1Q8VEE4 Gm29541-201ENSMUST00000191351 678 ntBASIC13.27□□□□□ -0.29
Rpa1Q8VEE4 Gm37319-201ENSMUST00000193500 636 ntBASIC13.27□□□□□ -0.29
Rpa1Q8VEE4 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.27□□□□□ -0.29
Rpa1Q8VEE4 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.27□□□□□ -0.29
Rpa1Q8VEE4 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Rpa1Q8VEE4 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpa1Q8VEE4 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpa1Q8VEE4 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpa1Q8VEE4 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpa1Q8VEE4 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Rpa1Q8VEE4 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpa1Q8VEE4 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpa1Q8VEE4 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpa1Q8VEE4 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpa1Q8VEE4 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpa1Q8VEE4 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpa1Q8VEE4 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.27□□□□□ -0.29
Rpa1Q8VEE4 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpa1Q8VEE4 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpa1Q8VEE4 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpa1Q8VEE4 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Rpa1Q8VEE4 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rpa1Q8VEE4 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.26□□□□□ -0.29
Rpa1Q8VEE4 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpa1Q8VEE4 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpa1Q8VEE4 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Rpa1Q8VEE4 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rpa1Q8VEE4 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.26□□□□□ -0.29
Rpa1Q8VEE4 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.26□□□□□ -0.29
Rpa1Q8VEE4 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC13.26□□□□□ -0.29
Rpa1Q8VEE4 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.26□□□□□ -0.29
Rpa1Q8VEE4 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rpa1Q8VEE4 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.26□□□□□ -0.29
Rpa1Q8VEE4 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rpa1Q8VEE4 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.26□□□□□ -0.29
Rpa1Q8VEE4 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.26□□□□□ -0.29
Rpa1Q8VEE4 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.26□□□□□ -0.29
Rpa1Q8VEE4 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpa1Q8VEE4 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpa1Q8VEE4 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpa1Q8VEE4 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpa1Q8VEE4 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpa1Q8VEE4 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpa1Q8VEE4 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rpa1Q8VEE4 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpa1Q8VEE4 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rpa1Q8VEE4 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rpa1Q8VEE4 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rpa1Q8VEE4 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.25□□□□□ -0.29
Rpa1Q8VEE4 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rpa1Q8VEE4 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rpa1Q8VEE4 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rpa1Q8VEE4 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rpa1Q8VEE4 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rpa1Q8VEE4 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rpa1Q8VEE4 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rpa1Q8VEE4 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rpa1Q8VEE4 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.25□□□□□ -0.29
Rpa1Q8VEE4 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms