Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Shisa4Q8CA71 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Shisa4Q8CA71 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Shisa4Q8CA71 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Shisa4Q8CA71 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Shisa4Q8CA71 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shisa4Q8CA71 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shisa4Q8CA71 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Shisa4Q8CA71 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shisa4Q8CA71 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Shisa4Q8CA71 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shisa4Q8CA71 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shisa4Q8CA71 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shisa4Q8CA71 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shisa4Q8CA71 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shisa4Q8CA71 Gm11658-201ENSMUST00000120913 1008 ntBASIC15.2■□□□□ 0.02
Shisa4Q8CA71 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Shisa4Q8CA71 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shisa4Q8CA71 Gm2467-201ENSMUST00000182266 1010 ntBASIC15.2■□□□□ 0.02
Shisa4Q8CA71 Gm6981-201ENSMUST00000182467 1008 ntBASIC15.2■□□□□ 0.02
Shisa4Q8CA71 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC15.2■□□□□ 0.02
Shisa4Q8CA71 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Shisa4Q8CA71 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
Shisa4Q8CA71 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shisa4Q8CA71 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shisa4Q8CA71 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shisa4Q8CA71 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shisa4Q8CA71 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shisa4Q8CA71 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shisa4Q8CA71 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shisa4Q8CA71 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shisa4Q8CA71 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shisa4Q8CA71 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shisa4Q8CA71 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shisa4Q8CA71 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shisa4Q8CA71 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Shisa4Q8CA71 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Shisa4Q8CA71 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shisa4Q8CA71 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Shisa4Q8CA71 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Shisa4Q8CA71 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Shisa4Q8CA71 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shisa4Q8CA71 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC15.19■□□□□ 0.02
Shisa4Q8CA71 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC15.19■□□□□ 0.02
Shisa4Q8CA71 Gm12291-201ENSMUST00000121627 311 ntBASIC15.19■□□□□ 0.02
Shisa4Q8CA71 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Shisa4Q8CA71 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC15.19■□□□□ 0.02
Shisa4Q8CA71 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Shisa4Q8CA71 Gm5850-201ENSMUST00000192923 1206 ntBASIC15.19■□□□□ 0.02
Shisa4Q8CA71 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Shisa4Q8CA71 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC15.19■□□□□ 0.02
Shisa4Q8CA71 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC15.19■□□□□ 0.02
Shisa4Q8CA71 Gm17823-201ENSMUST00000217830 1006 ntBASIC15.19■□□□□ 0.02
Shisa4Q8CA71 Gm19309-201ENSMUST00000218295 205 ntBASIC15.19■□□□□ 0.02
Shisa4Q8CA71 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shisa4Q8CA71 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Shisa4Q8CA71 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shisa4Q8CA71 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shisa4Q8CA71 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Shisa4Q8CA71 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Shisa4Q8CA71 Gm7002-201ENSMUST00000221386 2165 ntBASIC15.19■□□□□ 0.02
Shisa4Q8CA71 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shisa4Q8CA71 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Shisa4Q8CA71 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shisa4Q8CA71 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shisa4Q8CA71 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shisa4Q8CA71 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shisa4Q8CA71 Gm8793-201ENSMUST00000183069 1303 ntBASIC15.18■□□□□ 0.02
Shisa4Q8CA71 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Shisa4Q8CA71 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC15.18■□□□□ 0.02
Shisa4Q8CA71 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shisa4Q8CA71 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shisa4Q8CA71 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shisa4Q8CA71 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Shisa4Q8CA71 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shisa4Q8CA71 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shisa4Q8CA71 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shisa4Q8CA71 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shisa4Q8CA71 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Shisa4Q8CA71 Gm7809-201ENSMUST00000153199 742 ntBASIC15.18■□□□□ 0.02
Shisa4Q8CA71 Gm26185-201ENSMUST00000157692 266 ntBASIC15.18■□□□□ 0.02
Shisa4Q8CA71 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Shisa4Q8CA71 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shisa4Q8CA71 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC15.18■□□□□ 0.02
Shisa4Q8CA71 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shisa4Q8CA71 Gm4768-201ENSMUST00000206199 686 ntBASIC15.18■□□□□ 0.02
Shisa4Q8CA71 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Shisa4Q8CA71 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC15.18■□□□□ 0.02
Shisa4Q8CA71 Gm4935-201ENSMUST00000221316 1198 ntBASIC15.18■□□□□ 0.02
Shisa4Q8CA71 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Shisa4Q8CA71 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Shisa4Q8CA71 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shisa4Q8CA71 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shisa4Q8CA71 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Shisa4Q8CA71 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shisa4Q8CA71 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shisa4Q8CA71 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shisa4Q8CA71 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shisa4Q8CA71 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC15.17■□□□□ 0.02
Shisa4Q8CA71 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms