Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Efnb3O35393 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Efnb3O35393 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Efnb3O35393 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Efnb3O35393 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Efnb3O35393 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Efnb3O35393 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Efnb3O35393 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Efnb3O35393 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Efnb3O35393 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Efnb3O35393 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Efnb3O35393 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Efnb3O35393 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC10.4□□□□□ -0.74
Efnb3O35393 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Efnb3O35393 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Efnb3O35393 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Efnb3O35393 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Efnb3O35393 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Efnb3O35393 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC10.4□□□□□ -0.74
Efnb3O35393 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Efnb3O35393 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Efnb3O35393 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC10.4□□□□□ -0.74
Efnb3O35393 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.74
Efnb3O35393 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Efnb3O35393 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC10.4□□□□□ -0.74
Efnb3O35393 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Efnb3O35393 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Efnb3O35393 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Efnb3O35393 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Efnb3O35393 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Efnb3O35393 Gm8410-201ENSMUST00000117225 605 ntBASIC10.4□□□□□ -0.74
Efnb3O35393 Gm15653-201ENSMUST00000119247 907 ntBASIC10.4□□□□□ -0.74
Efnb3O35393 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Efnb3O35393 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC10.4□□□□□ -0.74
Efnb3O35393 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Efnb3O35393 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC10.4□□□□□ -0.74
Efnb3O35393 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC10.4□□□□□ -0.74
Efnb3O35393 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Efnb3O35393 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Efnb3O35393 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC10.4□□□□□ -0.74
Efnb3O35393 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC10.4□□□□□ -0.74
Efnb3O35393 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Efnb3O35393 Gm5425-201ENSMUST00000214125 459 ntBASIC10.4□□□□□ -0.74
Efnb3O35393 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Efnb3O35393 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.74
Efnb3O35393 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC10.4□□□□□ -0.74
Efnb3O35393 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Efnb3O35393 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Efnb3O35393 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Efnb3O35393 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Efnb3O35393 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Efnb3O35393 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Efnb3O35393 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Efnb3O35393 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC10.4□□□□□ -0.74
Efnb3O35393 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC10.4□□□□□ -0.74
Efnb3O35393 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Efnb3O35393 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Efnb3O35393 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Efnb3O35393 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Efnb3O35393 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Efnb3O35393 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Efnb3O35393 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Efnb3O35393 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC10.39□□□□□ -0.75
Efnb3O35393 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC10.39□□□□□ -0.75
Efnb3O35393 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC10.39□□□□□ -0.75
Efnb3O35393 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Efnb3O35393 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Efnb3O35393 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Efnb3O35393 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Efnb3O35393 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Efnb3O35393 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC10.39□□□□□ -0.75
Efnb3O35393 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Efnb3O35393 AC154767.3-201ENSMUST00000225150 1342 ntBASIC10.39□□□□□ -0.75
Efnb3O35393 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Efnb3O35393 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.39□□□□□ -0.75
Efnb3O35393 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Efnb3O35393 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Efnb3O35393 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Efnb3O35393 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Efnb3O35393 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Efnb3O35393 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Efnb3O35393 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Efnb3O35393 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Efnb3O35393 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Efnb3O35393 Gm15393-201ENSMUST00000120499 219 ntBASIC10.39□□□□□ -0.75
Efnb3O35393 Mir1897-201ENSMUST00000122581 272 ntBASIC10.39□□□□□ -0.75
Efnb3O35393 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Efnb3O35393 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC10.39□□□□□ -0.75
Efnb3O35393 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Efnb3O35393 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Efnb3O35393 Gm28630-201ENSMUST00000187806 498 ntBASIC10.39□□□□□ -0.75
Efnb3O35393 Gm10766-202ENSMUST00000194123 606 ntBASIC10.39□□□□□ -0.75
Efnb3O35393 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC10.39□□□□□ -0.75
Efnb3O35393 AC093022.5-201ENSMUST00000226841 1079 ntBASIC10.39□□□□□ -0.75
Efnb3O35393 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
Efnb3O35393 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Efnb3O35393 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Efnb3O35393 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC10.39□□□□□ -0.75
Efnb3O35393 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Efnb3O35393 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms