Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.52□□□□□ -0.24
Trove2O08848 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trove2O08848 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Trove2O08848 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.52□□□□□ -0.24
Trove2O08848 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trove2O08848 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Trove2O08848 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trove2O08848 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trove2O08848 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trove2O08848 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trove2O08848 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trove2O08848 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trove2O08848 Gm15460-201ENSMUST00000118147 391 ntBASIC13.52□□□□□ -0.25
Trove2O08848 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trove2O08848 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trove2O08848 Gm17837-201ENSMUST00000186435 985 ntBASIC13.52□□□□□ -0.25
Trove2O08848 Gm44344-201ENSMUST00000200287 129 ntBASIC13.52□□□□□ -0.25
Trove2O08848 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.52□□□□□ -0.25
Trove2O08848 Gm6888-201ENSMUST00000221983 706 ntBASIC13.52□□□□□ -0.25
Trove2O08848 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.52□□□□□ -0.25
Trove2O08848 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.52□□□□□ -0.25
Trove2O08848 Gm5867-201ENSMUST00000063197 592 ntBASIC13.52□□□□□ -0.25
Trove2O08848 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trove2O08848 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.52□□□□□ -0.25
Trove2O08848 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trove2O08848 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Trove2O08848 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trove2O08848 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trove2O08848 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trove2O08848 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC13.52□□□□□ -0.25
Trove2O08848 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trove2O08848 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trove2O08848 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trove2O08848 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Trove2O08848 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trove2O08848 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.52□□□□□ -0.25
Trove2O08848 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trove2O08848 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trove2O08848 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Trove2O08848 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trove2O08848 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Trove2O08848 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trove2O08848 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.51□□□□□ -0.25
Trove2O08848 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trove2O08848 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trove2O08848 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.51□□□□□ -0.25
Trove2O08848 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trove2O08848 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.51□□□□□ -0.25
Trove2O08848 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trove2O08848 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trove2O08848 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trove2O08848 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.51□□□□□ -0.25
Trove2O08848 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trove2O08848 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trove2O08848 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.51□□□□□ -0.25
Trove2O08848 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Trove2O08848 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trove2O08848 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.51□□□□□ -0.25
Trove2O08848 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.51□□□□□ -0.25
Trove2O08848 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trove2O08848 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trove2O08848 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trove2O08848 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trove2O08848 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trove2O08848 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trove2O08848 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Trove2O08848 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.51□□□□□ -0.25
Trove2O08848 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trove2O08848 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trove2O08848 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trove2O08848 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trove2O08848 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trove2O08848 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.51□□□□□ -0.25
Trove2O08848 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trove2O08848 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trove2O08848 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.51□□□□□ -0.25
Trove2O08848 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.51□□□□□ -0.25
Trove2O08848 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trove2O08848 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.5□□□□□ -0.25
Trove2O08848 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Trove2O08848 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trove2O08848 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trove2O08848 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.5□□□□□ -0.25
Trove2O08848 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trove2O08848 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.5□□□□□ -0.25
Trove2O08848 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.5□□□□□ -0.25
Trove2O08848 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trove2O08848 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trove2O08848 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.5□□□□□ -0.25
Trove2O08848 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trove2O08848 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.5□□□□□ -0.25
Trove2O08848 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trove2O08848 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trove2O08848 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trove2O08848 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trove2O08848 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trove2O08848 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trove2O08848 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trove2O08848 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.5□□□□□ -0.25
Trove2O08848 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms