Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Gm15487-201ENSMUST00000122373 465 ntBASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 Mir8102-201ENSMUST00000184148 139 ntBASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav5-4A0A075B652 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5-4A0A075B652 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5-4A0A075B652 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.04□□□□□ -0.64
Trav5-4A0A075B652 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Trav5-4A0A075B652 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5-4A0A075B652 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.04□□□□□ -0.64
Trav5-4A0A075B652 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5-4A0A075B652 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.04□□□□□ -0.64
Trav5-4A0A075B652 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.04□□□□□ -0.64
Trav5-4A0A075B652 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5-4A0A075B652 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5-4A0A075B652 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5-4A0A075B652 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trav5-4A0A075B652 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.04□□□□□ -0.64
Trav5-4A0A075B652 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trav5-4A0A075B652 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5-4A0A075B652 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trav5-4A0A075B652 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5-4A0A075B652 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5-4A0A075B652 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.04□□□□□ -0.64
Trav5-4A0A075B652 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Trav5-4A0A075B652 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC11.04□□□□□ -0.64
Trav5-4A0A075B652 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5-4A0A075B652 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5-4A0A075B652 Gm27838-201ENSMUST00000184829 128 ntBASIC11.04□□□□□ -0.64
Trav5-4A0A075B652 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Trav5-4A0A075B652 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Trav5-4A0A075B652 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5-4A0A075B652 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5-4A0A075B652 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5-4A0A075B652 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5-4A0A075B652 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5-4A0A075B652 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5-4A0A075B652 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5-4A0A075B652 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5-4A0A075B652 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5-4A0A075B652 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5-4A0A075B652 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.04□□□□□ -0.64
Trav5-4A0A075B652 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5-4A0A075B652 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Trav5-4A0A075B652 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5-4A0A075B652 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5-4A0A075B652 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5-4A0A075B652 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav5-4A0A075B652 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.04□□□□□ -0.64
Trav5-4A0A075B652 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 Mir7684-201ENSMUST00000183858 60 ntBASIC11.03□□□□□ -0.64
Trav5-4A0A075B652 Gm29667-201ENSMUST00000190817 490 ntBASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms