Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgn3Q9DCB1 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgn3Q9DCB1 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Hmgn3Q9DCB1 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgn3Q9DCB1 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.36□□□□□ -0.43
Hmgn3Q9DCB1 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.36□□□□□ -0.43
Hmgn3Q9DCB1 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgn3Q9DCB1 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmgn3Q9DCB1 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn3Q9DCB1 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn3Q9DCB1 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn3Q9DCB1 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn3Q9DCB1 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn3Q9DCB1 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn3Q9DCB1 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn3Q9DCB1 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn3Q9DCB1 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.35□□□□□ -0.43
Hmgn3Q9DCB1 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn3Q9DCB1 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn3Q9DCB1 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn3Q9DCB1 Gm15770-201ENSMUST00000117498 584 ntBASIC12.35□□□□□ -0.43
Hmgn3Q9DCB1 Gm15467-201ENSMUST00000120582 445 ntBASIC12.35□□□□□ -0.43
Hmgn3Q9DCB1 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn3Q9DCB1 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn3Q9DCB1 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Hmgn3Q9DCB1 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn3Q9DCB1 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.35□□□□□ -0.43
Hmgn3Q9DCB1 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn3Q9DCB1 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.35□□□□□ -0.43
Hmgn3Q9DCB1 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Hmgn3Q9DCB1 Gm10175-201ENSMUST00000086013 645 ntBASIC12.35□□□□□ -0.43
Hmgn3Q9DCB1 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn3Q9DCB1 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn3Q9DCB1 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn3Q9DCB1 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn3Q9DCB1 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn3Q9DCB1 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn3Q9DCB1 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn3Q9DCB1 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn3Q9DCB1 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn3Q9DCB1 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn3Q9DCB1 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn3Q9DCB1 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn3Q9DCB1 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.35□□□□□ -0.43
Hmgn3Q9DCB1 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn3Q9DCB1 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn3Q9DCB1 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn3Q9DCB1 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.35□□□□□ -0.43
Hmgn3Q9DCB1 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.35□□□□□ -0.43
Hmgn3Q9DCB1 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.35□□□□□ -0.43
Hmgn3Q9DCB1 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn3Q9DCB1 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmgn3Q9DCB1 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgn3Q9DCB1 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgn3Q9DCB1 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgn3Q9DCB1 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgn3Q9DCB1 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Hmgn3Q9DCB1 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgn3Q9DCB1 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgn3Q9DCB1 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgn3Q9DCB1 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgn3Q9DCB1 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgn3Q9DCB1 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgn3Q9DCB1 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgn3Q9DCB1 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgn3Q9DCB1 Gm14494-201ENSMUST00000118786 435 ntBASIC12.34□□□□□ -0.43
Hmgn3Q9DCB1 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.34□□□□□ -0.43
Hmgn3Q9DCB1 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.34□□□□□ -0.43
Hmgn3Q9DCB1 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.34□□□□□ -0.43
Hmgn3Q9DCB1 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Hmgn3Q9DCB1 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.34□□□□□ -0.43
Hmgn3Q9DCB1 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.34□□□□□ -0.43
Hmgn3Q9DCB1 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.34□□□□□ -0.43
Hmgn3Q9DCB1 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgn3Q9DCB1 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Hmgn3Q9DCB1 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.34□□□□□ -0.43
Hmgn3Q9DCB1 Gm45612-201ENSMUST00000211320 160 ntBASIC12.34□□□□□ -0.43
Hmgn3Q9DCB1 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.34□□□□□ -0.43
Hmgn3Q9DCB1 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgn3Q9DCB1 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgn3Q9DCB1 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgn3Q9DCB1 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgn3Q9DCB1 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgn3Q9DCB1 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgn3Q9DCB1 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.34□□□□□ -0.43
Hmgn3Q9DCB1 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgn3Q9DCB1 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.34□□□□□ -0.43
Hmgn3Q9DCB1 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.34□□□□□ -0.43
Hmgn3Q9DCB1 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgn3Q9DCB1 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgn3Q9DCB1 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgn3Q9DCB1 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hmgn3Q9DCB1 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Hmgn3Q9DCB1 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Hmgn3Q9DCB1 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Hmgn3Q9DCB1 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgn3Q9DCB1 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgn3Q9DCB1 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.33□□□□□ -0.44
Hmgn3Q9DCB1 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgn3Q9DCB1 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms