Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pfdn1Q9CWM4 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.52□□□□□ -0.56
Pfdn1Q9CWM4 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pfdn1Q9CWM4 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn1Q9CWM4 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.52□□□□□ -0.57
Pfdn1Q9CWM4 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn1Q9CWM4 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn1Q9CWM4 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.52□□□□□ -0.57
Pfdn1Q9CWM4 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn1Q9CWM4 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn1Q9CWM4 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Pfdn1Q9CWM4 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC11.52□□□□□ -0.57
Pfdn1Q9CWM4 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn1Q9CWM4 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC11.52□□□□□ -0.57
Pfdn1Q9CWM4 Gm29518-201ENSMUST00000190858 372 ntBASIC11.52□□□□□ -0.57
Pfdn1Q9CWM4 Gm43332-201ENSMUST00000202511 1044 ntBASIC11.52□□□□□ -0.57
Pfdn1Q9CWM4 CT030704.2-201ENSMUST00000228887 494 ntBASIC11.52□□□□□ -0.57
Pfdn1Q9CWM4 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC11.52□□□□□ -0.57
Pfdn1Q9CWM4 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn1Q9CWM4 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Pfdn1Q9CWM4 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn1Q9CWM4 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn1Q9CWM4 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn1Q9CWM4 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn1Q9CWM4 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
Pfdn1Q9CWM4 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn1Q9CWM4 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.52□□□□□ -0.57
Pfdn1Q9CWM4 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn1Q9CWM4 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn1Q9CWM4 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn1Q9CWM4 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn1Q9CWM4 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Pfdn1Q9CWM4 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn1Q9CWM4 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn1Q9CWM4 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn1Q9CWM4 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Pfdn1Q9CWM4 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.52□□□□□ -0.57
Pfdn1Q9CWM4 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Pfdn1Q9CWM4 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.52□□□□□ -0.57
Pfdn1Q9CWM4 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pfdn1Q9CWM4 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 Gm37584-201ENSMUST00000193595 1290 ntBASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 Gm44719-201ENSMUST00000206404 149 ntBASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.51□□□□□ -0.57
Pfdn1Q9CWM4 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Pfdn1Q9CWM4 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Pfdn1Q9CWM4 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn1Q9CWM4 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn1Q9CWM4 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn1Q9CWM4 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn1Q9CWM4 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn1Q9CWM4 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn1Q9CWM4 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Pfdn1Q9CWM4 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn1Q9CWM4 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pfdn1Q9CWM4 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.5□□□□□ -0.57
Pfdn1Q9CWM4 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms