Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a6Q8C6K9 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a6Q8C6K9 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Col6a6Q8C6K9 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.87□□□□□ -0.51
Col6a6Q8C6K9 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Col6a6Q8C6K9 Gm14208-201ENSMUST00000119645 678 ntBASIC11.87□□□□□ -0.51
Col6a6Q8C6K9 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.87□□□□□ -0.51
Col6a6Q8C6K9 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a6Q8C6K9 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Col6a6Q8C6K9 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a6Q8C6K9 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a6Q8C6K9 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a6Q8C6K9 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a6Q8C6K9 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a6Q8C6K9 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC11.87□□□□□ -0.51
Col6a6Q8C6K9 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a6Q8C6K9 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a6Q8C6K9 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a6Q8C6K9 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a6Q8C6K9 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Col6a6Q8C6K9 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a6Q8C6K9 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a6Q8C6K9 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a6Q8C6K9 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Col6a6Q8C6K9 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a6Q8C6K9 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a6Q8C6K9 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a6Q8C6K9 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a6Q8C6K9 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Col6a6Q8C6K9 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.86□□□□□ -0.51
Col6a6Q8C6K9 Gm28450-201ENSMUST00000187349 638 ntBASIC11.86□□□□□ -0.51
Col6a6Q8C6K9 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.86□□□□□ -0.51
Col6a6Q8C6K9 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a6Q8C6K9 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Col6a6Q8C6K9 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Col6a6Q8C6K9 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a6Q8C6K9 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.86□□□□□ -0.51
Col6a6Q8C6K9 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a6Q8C6K9 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a6Q8C6K9 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a6Q8C6K9 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a6Q8C6K9 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a6Q8C6K9 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a6Q8C6K9 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a6Q8C6K9 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a6Q8C6K9 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a6Q8C6K9 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a6Q8C6K9 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a6Q8C6K9 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a6Q8C6K9 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a6Q8C6K9 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.86□□□□□ -0.51
Col6a6Q8C6K9 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a6Q8C6K9 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a6Q8C6K9 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a6Q8C6K9 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a6Q8C6K9 Gm9083-201ENSMUST00000120423 819 ntBASIC11.86□□□□□ -0.51
Col6a6Q8C6K9 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.86□□□□□ -0.51
Col6a6Q8C6K9 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.86□□□□□ -0.51
Col6a6Q8C6K9 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Col6a6Q8C6K9 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a6Q8C6K9 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a6Q8C6K9 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a6Q8C6K9 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Col6a6Q8C6K9 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a6Q8C6K9 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC11.86□□□□□ -0.51
Col6a6Q8C6K9 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a6Q8C6K9 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a6Q8C6K9 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a6Q8C6K9 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a6Q8C6K9 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col6a6Q8C6K9 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.85□□□□□ -0.51
Col6a6Q8C6K9 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.85□□□□□ -0.51
Col6a6Q8C6K9 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Col6a6Q8C6K9 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a6Q8C6K9 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Col6a6Q8C6K9 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.85□□□□□ -0.51
Col6a6Q8C6K9 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a6Q8C6K9 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC11.85□□□□□ -0.51
Col6a6Q8C6K9 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.85□□□□□ -0.51
Col6a6Q8C6K9 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.85□□□□□ -0.51
Col6a6Q8C6K9 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a6Q8C6K9 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a6Q8C6K9 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Col6a6Q8C6K9 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a6Q8C6K9 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Col6a6Q8C6K9 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a6Q8C6K9 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a6Q8C6K9 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a6Q8C6K9 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a6Q8C6K9 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a6Q8C6K9 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a6Q8C6K9 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a6Q8C6K9 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Col6a6Q8C6K9 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col6a6Q8C6K9 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Col6a6Q8C6K9 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.85□□□□□ -0.51
Col6a6Q8C6K9 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Col6a6Q8C6K9 Gm44126-201ENSMUST00000204831 514 ntBASIC11.85□□□□□ -0.51
Col6a6Q8C6K9 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.85□□□□□ -0.51
Col6a6Q8C6K9 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms