Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Casc1-208ENSMUST00000204105 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trim63Q38HM4 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trim63Q38HM4 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trim63Q38HM4 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trim63Q38HM4 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trim63Q38HM4 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.8□□□□□ -0.68
Trim63Q38HM4 Arhgef3-204ENSMUST00000225949 3198 ntBASIC10.8□□□□□ -0.68
Trim63Q38HM4 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trim63Q38HM4 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trim63Q38HM4 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trim63Q38HM4 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.8□□□□□ -0.68
Trim63Q38HM4 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
Trim63Q38HM4 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC10.8□□□□□ -0.68
Trim63Q38HM4 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trim63Q38HM4 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trim63Q38HM4 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trim63Q38HM4 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trim63Q38HM4 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trim63Q38HM4 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trim63Q38HM4 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trim63Q38HM4 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Trim63Q38HM4 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.79□□□□□ -0.68
Trim63Q38HM4 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trim63Q38HM4 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Trim63Q38HM4 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trim63Q38HM4 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trim63Q38HM4 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trim63Q38HM4 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trim63Q38HM4 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.79□□□□□ -0.68
Trim63Q38HM4 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trim63Q38HM4 Gm5184-201ENSMUST00000220417 1702 ntBASIC10.79□□□□□ -0.68
Trim63Q38HM4 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Trim63Q38HM4 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trim63Q38HM4 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trim63Q38HM4 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trim63Q38HM4 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC10.79□□□□□ -0.68
Trim63Q38HM4 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC10.79□□□□□ -0.68
Trim63Q38HM4 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trim63Q38HM4 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Trim63Q38HM4 Gm27389-201ENSMUST00000183622 195 ntBASIC10.79□□□□□ -0.68
Trim63Q38HM4 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trim63Q38HM4 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trim63Q38HM4 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trim63Q38HM4 AC159195.1-201ENSMUST00000225867 2086 ntBASIC10.79□□□□□ -0.68
Trim63Q38HM4 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trim63Q38HM4 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trim63Q38HM4 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trim63Q38HM4 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC10.79□□□□□ -0.68
Trim63Q38HM4 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trim63Q38HM4 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trim63Q38HM4 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Trim63Q38HM4 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trim63Q38HM4 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Trim63Q38HM4 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trim63Q38HM4 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trim63Q38HM4 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trim63Q38HM4 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trim63Q38HM4 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Trim63Q38HM4 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trim63Q38HM4 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trim63Q38HM4 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trim63Q38HM4 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trim63Q38HM4 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trim63Q38HM4 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Trim63Q38HM4 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Trim63Q38HM4 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trim63Q38HM4 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.78□□□□□ -0.68
Trim63Q38HM4 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trim63Q38HM4 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.78□□□□□ -0.68
Trim63Q38HM4 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Trim63Q38HM4 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trim63Q38HM4 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trim63Q38HM4 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trim63Q38HM4 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trim63Q38HM4 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trim63Q38HM4 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trim63Q38HM4 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Trim63Q38HM4 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Trim63Q38HM4 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.78□□□□□ -0.68
Trim63Q38HM4 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Trim63Q38HM4 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trim63Q38HM4 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC10.78□□□□□ -0.68
Trim63Q38HM4 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Trim63Q38HM4 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trim63Q38HM4 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trim63Q38HM4 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trim63Q38HM4 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trim63Q38HM4 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trim63Q38HM4 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trim63Q38HM4 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trim63Q38HM4 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trim63Q38HM4 Gm8520-201ENSMUST00000186517 868 ntBASIC10.78□□□□□ -0.68
Trim63Q38HM4 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC10.78□□□□□ -0.68
Trim63Q38HM4 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC10.78□□□□□ -0.68
Trim63Q38HM4 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC10.78□□□□□ -0.68
Trim63Q38HM4 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC10.78□□□□□ -0.68
Trim63Q38HM4 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trim63Q38HM4 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trim63Q38HM4 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trim63Q38HM4 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms