Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-1P50220 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-1P50220 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-1P50220 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC10.92□□□□□ -0.66
Nkx2-1P50220 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-1P50220 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-1P50220 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-1P50220 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-1P50220 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-1P50220 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-1P50220 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Nkx2-1P50220 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-1P50220 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-1P50220 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC10.92□□□□□ -0.66
Nkx2-1P50220 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-1P50220 Gm15770-201ENSMUST00000117498 584 ntBASIC10.92□□□□□ -0.66
Nkx2-1P50220 Gm11557-201ENSMUST00000120200 1008 ntBASIC10.92□□□□□ -0.66
Nkx2-1P50220 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-1P50220 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC10.92□□□□□ -0.66
Nkx2-1P50220 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC10.92□□□□□ -0.66
Nkx2-1P50220 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC10.92□□□□□ -0.66
Nkx2-1P50220 Gm8927-201ENSMUST00000181978 981 ntBASIC10.92□□□□□ -0.66
Nkx2-1P50220 Gm37935-201ENSMUST00000192012 982 ntBASIC10.92□□□□□ -0.66
Nkx2-1P50220 Gm44335-201ENSMUST00000196879 141 ntBASIC10.92□□□□□ -0.66
Nkx2-1P50220 Gm44297-201ENSMUST00000198304 141 ntBASIC10.92□□□□□ -0.66
Nkx2-1P50220 Gm44346-201ENSMUST00000198851 141 ntBASIC10.92□□□□□ -0.66
Nkx2-1P50220 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-1P50220 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Nkx2-1P50220 AC154806.6-201ENSMUST00000228192 202 ntBASIC10.92□□□□□ -0.66
Nkx2-1P50220 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-1P50220 Gm3222-201ENSMUST00000071282 990 ntBASIC10.92□□□□□ -0.66
Nkx2-1P50220 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-1P50220 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Nkx2-1P50220 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Nkx2-1P50220 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-1P50220 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-1P50220 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-1P50220 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-1P50220 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Nkx2-1P50220 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC10.92□□□□□ -0.66
Nkx2-1P50220 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-1P50220 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-1P50220 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-1P50220 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-1P50220 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Nkx2-1P50220 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-1P50220 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-1P50220 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC10.92□□□□□ -0.66
Nkx2-1P50220 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.92□□□□□ -0.66
Nkx2-1P50220 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-1P50220 Gm37437-201ENSMUST00000194451 1937 ntBASIC10.92□□□□□ -0.66
Nkx2-1P50220 Gm18263-201ENSMUST00000220846 1928 ntBASIC10.92□□□□□ -0.66
Nkx2-1P50220 AC241621.2-201ENSMUST00000223991 2151 ntBASIC10.92□□□□□ -0.66
Nkx2-1P50220 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-1P50220 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC10.91□□□□□ -0.66
Nkx2-1P50220 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Nkx2-1P50220 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-1P50220 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-1P50220 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-1P50220 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Nkx2-1P50220 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-1P50220 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-1P50220 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-1P50220 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-1P50220 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-1P50220 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC10.91□□□□□ -0.66
Nkx2-1P50220 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-1P50220 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Nkx2-1P50220 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Nkx2-1P50220 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC10.91□□□□□ -0.66
Nkx2-1P50220 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-1P50220 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-1P50220 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC10.91□□□□□ -0.66
Nkx2-1P50220 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC10.91□□□□□ -0.66
Nkx2-1P50220 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC10.91□□□□□ -0.66
Nkx2-1P50220 Gm33320-201ENSMUST00000192232 530 ntBASIC10.91□□□□□ -0.66
Nkx2-1P50220 Gm43474-201ENSMUST00000196415 774 ntBASIC10.91□□□□□ -0.66
Nkx2-1P50220 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-1P50220 AC151286.1-201ENSMUST00000198489 145 ntBASIC10.91□□□□□ -0.66
Nkx2-1P50220 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-1P50220 Chchd1-203ENSMUST00000224633 557 ntBASIC10.91□□□□□ -0.66
Nkx2-1P50220 AC132467.2-202ENSMUST00000227726 559 ntBASIC10.91□□□□□ -0.66
Nkx2-1P50220 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-1P50220 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-1P50220 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-1P50220 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Nkx2-1P50220 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC10.91□□□□□ -0.66
Nkx2-1P50220 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-1P50220 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-1P50220 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.91□□□□□ -0.66
Nkx2-1P50220 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-1P50220 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-1P50220 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Nkx2-1P50220 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Nkx2-1P50220 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-1P50220 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-1P50220 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-1P50220 Gm42863-201ENSMUST00000197875 2958 ntBASIC10.91□□□□□ -0.66
Nkx2-1P50220 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx2-1P50220 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms