Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Prox1P48437 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Prox1P48437 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prox1P48437 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prox1P48437 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prox1P48437 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prox1P48437 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Prox1P48437 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prox1P48437 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prox1P48437 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prox1P48437 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Prox1P48437 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prox1P48437 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prox1P48437 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prox1P48437 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prox1P48437 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.66□□□□□ -0.38
Prox1P48437 Mir1897-201ENSMUST00000122581 272 ntBASIC12.66□□□□□ -0.38
Prox1P48437 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Prox1P48437 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Prox1P48437 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.66□□□□□ -0.38
Prox1P48437 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.66□□□□□ -0.38
Prox1P48437 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Prox1P48437 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.66□□□□□ -0.38
Prox1P48437 Gm7774-201ENSMUST00000200064 533 ntBASIC12.66□□□□□ -0.38
Prox1P48437 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prox1P48437 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prox1P48437 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prox1P48437 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prox1P48437 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Prox1P48437 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.66□□□□□ -0.38
Prox1P48437 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prox1P48437 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prox1P48437 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prox1P48437 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.66□□□□□ -0.38
Prox1P48437 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prox1P48437 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.66□□□□□ -0.38
Prox1P48437 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prox1P48437 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prox1P48437 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Prox1P48437 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prox1P48437 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prox1P48437 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Prox1P48437 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Prox1P48437 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Prox1P48437 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Prox1P48437 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Prox1P48437 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.65□□□□□ -0.38
Prox1P48437 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Prox1P48437 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Prox1P48437 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Prox1P48437 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.65□□□□□ -0.38
Prox1P48437 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Prox1P48437 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Prox1P48437 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Prox1P48437 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Prox1P48437 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Prox1P48437 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Prox1P48437 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Prox1P48437 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Prox1P48437 Gm12428-201ENSMUST00000119844 727 ntBASIC12.65□□□□□ -0.38
Prox1P48437 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.65□□□□□ -0.38
Prox1P48437 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Prox1P48437 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.65□□□□□ -0.38
Prox1P48437 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Prox1P48437 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.65□□□□□ -0.38
Prox1P48437 Gm8927-201ENSMUST00000181978 981 ntBASIC12.65□□□□□ -0.38
Prox1P48437 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.65□□□□□ -0.38
Prox1P48437 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Prox1P48437 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Prox1P48437 Gm5779-201ENSMUST00000218467 910 ntBASIC12.65□□□□□ -0.38
Prox1P48437 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.65□□□□□ -0.38
Prox1P48437 Gm3222-201ENSMUST00000071282 990 ntBASIC12.65□□□□□ -0.38
Prox1P48437 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Prox1P48437 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Prox1P48437 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Prox1P48437 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Prox1P48437 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Prox1P48437 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Prox1P48437 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Prox1P48437 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Prox1P48437 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Prox1P48437 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Prox1P48437 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Prox1P48437 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Prox1P48437 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Prox1P48437 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Prox1P48437 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Prox1P48437 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Prox1P48437 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Prox1P48437 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Prox1P48437 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Prox1P48437 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.64□□□□□ -0.39
Prox1P48437 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.64□□□□□ -0.39
Prox1P48437 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Prox1P48437 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.64□□□□□ -0.39
Prox1P48437 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Prox1P48437 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Prox1P48437 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Prox1P48437 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Prox1P48437 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms