Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sox18P43680 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox18P43680 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sox18P43680 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Sox18P43680 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox18P43680 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox18P43680 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.71□□□□□ -0.37
Sox18P43680 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox18P43680 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox18P43680 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sox18P43680 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sox18P43680 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sox18P43680 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox18P43680 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox18P43680 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sox18P43680 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Sox18P43680 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.71□□□□□ -0.37
Sox18P43680 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.71□□□□□ -0.37
Sox18P43680 Gm12217-201ENSMUST00000118858 696 ntBASIC12.71□□□□□ -0.37
Sox18P43680 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.71□□□□□ -0.37
Sox18P43680 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.71□□□□□ -0.37
Sox18P43680 Gm12752-201ENSMUST00000121657 811 ntBASIC12.71□□□□□ -0.37
Sox18P43680 Gm2231-201ENSMUST00000125661 612 ntBASIC12.71□□□□□ -0.37
Sox18P43680 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.71□□□□□ -0.37
Sox18P43680 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Sox18P43680 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.71□□□□□ -0.37
Sox18P43680 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.71□□□□□ -0.37
Sox18P43680 Mir6927-201ENSMUST00000184494 71 ntBASIC12.71□□□□□ -0.37
Sox18P43680 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.71□□□□□ -0.37
Sox18P43680 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox18P43680 Gm43378-201ENSMUST00000199336 582 ntBASIC12.71□□□□□ -0.37
Sox18P43680 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.71□□□□□ -0.37
Sox18P43680 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox18P43680 Gm44683-201ENSMUST00000209088 484 ntBASIC12.71□□□□□ -0.37
Sox18P43680 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.71□□□□□ -0.37
Sox18P43680 Gm18556-201ENSMUST00000219748 1031 ntBASIC12.71□□□□□ -0.37
Sox18P43680 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.71□□□□□ -0.37
Sox18P43680 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.71□□□□□ -0.37
Sox18P43680 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox18P43680 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox18P43680 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox18P43680 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Sox18P43680 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Sox18P43680 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox18P43680 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Sox18P43680 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox18P43680 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox18P43680 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Sox18P43680 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox18P43680 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sox18P43680 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Sox18P43680 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Sox18P43680 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sox18P43680 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sox18P43680 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Sox18P43680 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.38
Sox18P43680 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox18P43680 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox18P43680 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.7□□□□□ -0.38
Sox18P43680 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox18P43680 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox18P43680 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox18P43680 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sox18P43680 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox18P43680 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sox18P43680 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sox18P43680 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox18P43680 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox18P43680 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox18P43680 Gm8805-201ENSMUST00000117848 313 ntBASIC12.7□□□□□ -0.38
Sox18P43680 Rbm48-202ENSMUST00000121877 617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox18P43680 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC12.7□□□□□ -0.38
Sox18P43680 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sox18P43680 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Sox18P43680 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.7□□□□□ -0.38
Sox18P43680 Gm29288-201ENSMUST00000191582 901 ntBASIC12.7□□□□□ -0.38
Sox18P43680 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Sox18P43680 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.7□□□□□ -0.38
Sox18P43680 Gm39375-201ENSMUST00000217068 1039 ntTSL 5 BASIC12.7□□□□□ -0.38
Sox18P43680 Gm5781-201ENSMUST00000219792 443 ntBASIC12.7□□□□□ -0.38
Sox18P43680 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
Sox18P43680 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox18P43680 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox18P43680 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox18P43680 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox18P43680 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Sox18P43680 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.7□□□□□ -0.38
Sox18P43680 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox18P43680 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox18P43680 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Sox18P43680 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox18P43680 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox18P43680 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox18P43680 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox18P43680 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox18P43680 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Sox18P43680 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox18P43680 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox18P43680 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox18P43680 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms