Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 MIR3909-201ENST00000579518 119 ntBASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 ZNF259P1-201ENST00000407656 1365 ntBASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV3-43DP0DP04 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
IGHV3-43DP0DP04 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
IGHV3-43DP0DP04 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
IGHV3-43DP0DP04 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
IGHV3-43DP0DP04 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
IGHV3-43DP0DP04 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.52□□□□□ -0.24
IGHV3-43DP0DP04 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
IGHV3-43DP0DP04 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
IGHV3-43DP0DP04 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.52□□□□□ -0.24
IGHV3-43DP0DP04 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
IGHV3-43DP0DP04 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
IGHV3-43DP0DP04 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.52□□□□□ -0.24
IGHV3-43DP0DP04 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.52□□□□□ -0.24
IGHV3-43DP0DP04 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
IGHV3-43DP0DP04 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.25
IGHV3-43DP0DP04 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
IGHV3-43DP0DP04 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.52□□□□□ -0.25
IGHV3-43DP0DP04 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.52□□□□□ -0.25
IGHV3-43DP0DP04 KRT18P34-201ENST00000488218 1270 ntBASIC13.52□□□□□ -0.25
IGHV3-43DP0DP04 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
IGHV3-43DP0DP04 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.52□□□□□ -0.25
IGHV3-43DP0DP04 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.52□□□□□ -0.25
IGHV3-43DP0DP04 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.52□□□□□ -0.25
IGHV3-43DP0DP04 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.52□□□□□ -0.25
IGHV3-43DP0DP04 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.52□□□□□ -0.25
IGHV3-43DP0DP04 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.52□□□□□ -0.25
IGHV3-43DP0DP04 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.52□□□□□ -0.25
IGHV3-43DP0DP04 AL513190.1-201ENST00000621254 727 ntBASIC13.52□□□□□ -0.25
IGHV3-43DP0DP04 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC13.52□□□□□ -0.25
IGHV3-43DP0DP04 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
IGHV3-43DP0DP04 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
IGHV3-43DP0DP04 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.52□□□□□ -0.25
IGHV3-43DP0DP04 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.52□□□□□ -0.25
IGHV3-43DP0DP04 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.52□□□□□ -0.25
IGHV3-43DP0DP04 AL592424.1-201ENST00000563624 1536 ntBASIC13.52□□□□□ -0.25
IGHV3-43DP0DP04 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.52□□□□□ -0.25
IGHV3-43DP0DP04 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.52□□□□□ -0.25
IGHV3-43DP0DP04 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
IGHV3-43DP0DP04 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
IGHV3-43DP0DP04 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
IGHV3-43DP0DP04 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
IGHV3-43DP0DP04 U82695.1-201ENST00000635752 1889 ntBASIC13.52□□□□□ -0.25
IGHV3-43DP0DP04 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.52□□□□□ -0.25
IGHV3-43DP0DP04 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
IGHV3-43DP0DP04 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.52□□□□□ -0.25
IGHV3-43DP0DP04 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
IGHV3-43DP0DP04 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
IGHV3-43DP0DP04 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
IGHV3-43DP0DP04 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
IGHV3-43DP0DP04 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.51□□□□□ -0.25
IGHV3-43DP0DP04 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
IGHV3-43DP0DP04 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
IGHV3-43DP0DP04 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
IGHV3-43DP0DP04 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
IGHV3-43DP0DP04 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
IGHV3-43DP0DP04 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
IGHV3-43DP0DP04 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.51□□□□□ -0.25
IGHV3-43DP0DP04 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC13.51□□□□□ -0.25
IGHV3-43DP0DP04 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
IGHV3-43DP0DP04 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
IGHV3-43DP0DP04 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
IGHV3-43DP0DP04 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
IGHV3-43DP0DP04 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
IGHV3-43DP0DP04 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
IGHV3-43DP0DP04 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.51□□□□□ -0.25
IGHV3-43DP0DP04 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
IGHV3-43DP0DP04 MED15P5-201ENST00000423150 992 ntBASIC13.51□□□□□ -0.25
IGHV3-43DP0DP04 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms