Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cfap99A0A140LIX9 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cfap99A0A140LIX9 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cfap99A0A140LIX9 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC15.76■□□□□ 0.11
Cfap99A0A140LIX9 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cfap99A0A140LIX9 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Cfap99A0A140LIX9 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC15.76■□□□□ 0.11
Cfap99A0A140LIX9 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cfap99A0A140LIX9 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cfap99A0A140LIX9 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cfap99A0A140LIX9 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cfap99A0A140LIX9 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cfap99A0A140LIX9 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cfap99A0A140LIX9 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cfap99A0A140LIX9 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cfap99A0A140LIX9 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Cfap99A0A140LIX9 Gm38346-201ENSMUST00000192379 2639 ntBASIC15.75■□□□□ 0.11
Cfap99A0A140LIX9 Gm12329-201ENSMUST00000120829 1007 ntBASIC15.75■□□□□ 0.11
Cfap99A0A140LIX9 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC15.75■□□□□ 0.11
Cfap99A0A140LIX9 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC15.75■□□□□ 0.11
Cfap99A0A140LIX9 Gm38144-201ENSMUST00000192790 465 ntBASIC15.75■□□□□ 0.11
Cfap99A0A140LIX9 Gm37008-201ENSMUST00000195712 319 ntBASIC15.75■□□□□ 0.11
Cfap99A0A140LIX9 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cfap99A0A140LIX9 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC15.75■□□□□ 0.11
Cfap99A0A140LIX9 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cfap99A0A140LIX9 Gm43822-201ENSMUST00000200285 476 ntBASIC15.75■□□□□ 0.11
Cfap99A0A140LIX9 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC15.75■□□□□ 0.11
Cfap99A0A140LIX9 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cfap99A0A140LIX9 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cfap99A0A140LIX9 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cfap99A0A140LIX9 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cfap99A0A140LIX9 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cfap99A0A140LIX9 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cfap99A0A140LIX9 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cfap99A0A140LIX9 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cfap99A0A140LIX9 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cfap99A0A140LIX9 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cfap99A0A140LIX9 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cfap99A0A140LIX9 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC15.75■□□□□ 0.11
Cfap99A0A140LIX9 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Cfap99A0A140LIX9 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cfap99A0A140LIX9 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cfap99A0A140LIX9 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cfap99A0A140LIX9 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cfap99A0A140LIX9 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cfap99A0A140LIX9 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cfap99A0A140LIX9 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Cfap99A0A140LIX9 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Cfap99A0A140LIX9 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cfap99A0A140LIX9 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cfap99A0A140LIX9 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC15.74■□□□□ 0.11
Cfap99A0A140LIX9 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cfap99A0A140LIX9 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cfap99A0A140LIX9 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cfap99A0A140LIX9 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cfap99A0A140LIX9 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cfap99A0A140LIX9 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cfap99A0A140LIX9 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cfap99A0A140LIX9 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cfap99A0A140LIX9 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cfap99A0A140LIX9 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cfap99A0A140LIX9 Gm27682-201ENSMUST00000183930 110 ntBASIC15.74■□□□□ 0.11
Cfap99A0A140LIX9 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC15.74■□□□□ 0.11
Cfap99A0A140LIX9 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cfap99A0A140LIX9 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cfap99A0A140LIX9 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cfap99A0A140LIX9 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cfap99A0A140LIX9 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cfap99A0A140LIX9 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cfap99A0A140LIX9 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cfap99A0A140LIX9 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cfap99A0A140LIX9 Gm44065-201ENSMUST00000203184 3527 ntBASIC15.74■□□□□ 0.11
Cfap99A0A140LIX9 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC15.74■□□□□ 0.11
Cfap99A0A140LIX9 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cfap99A0A140LIX9 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cfap99A0A140LIX9 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cfap99A0A140LIX9 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cfap99A0A140LIX9 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cfap99A0A140LIX9 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cfap99A0A140LIX9 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cfap99A0A140LIX9 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cfap99A0A140LIX9 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cfap99A0A140LIX9 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cfap99A0A140LIX9 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Cfap99A0A140LIX9 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cfap99A0A140LIX9 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cfap99A0A140LIX9 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.73■□□□□ 0.11
Cfap99A0A140LIX9 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Cfap99A0A140LIX9 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cfap99A0A140LIX9 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cfap99A0A140LIX9 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cfap99A0A140LIX9 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC15.73■□□□□ 0.11
Cfap99A0A140LIX9 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC15.73■□□□□ 0.11
Cfap99A0A140LIX9 Gm42627-201ENSMUST00000197347 224 ntBASIC15.73■□□□□ 0.11
Cfap99A0A140LIX9 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC15.73■□□□□ 0.11
Cfap99A0A140LIX9 Gm17330-201ENSMUST00000221047 165 ntBASIC15.73■□□□□ 0.11
Cfap99A0A140LIX9 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cfap99A0A140LIX9 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cfap99A0A140LIX9 Gm42928-201ENSMUST00000197338 3339 ntBASIC15.73■□□□□ 0.11
Cfap99A0A140LIX9 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms