Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ClcnkaQ9WUB7 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ClcnkaQ9WUB7 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
ClcnkaQ9WUB7 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ClcnkaQ9WUB7 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
ClcnkaQ9WUB7 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ClcnkaQ9WUB7 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ClcnkaQ9WUB7 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ClcnkaQ9WUB7 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ClcnkaQ9WUB7 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ClcnkaQ9WUB7 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ClcnkaQ9WUB7 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ClcnkaQ9WUB7 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ClcnkaQ9WUB7 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ClcnkaQ9WUB7 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
ClcnkaQ9WUB7 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ClcnkaQ9WUB7 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
ClcnkaQ9WUB7 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ClcnkaQ9WUB7 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ClcnkaQ9WUB7 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
ClcnkaQ9WUB7 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.52■□□□□ 0.72
ClcnkaQ9WUB7 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ClcnkaQ9WUB7 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ClcnkaQ9WUB7 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ClcnkaQ9WUB7 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ClcnkaQ9WUB7 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ClcnkaQ9WUB7 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.52■□□□□ 0.72
ClcnkaQ9WUB7 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.52■□□□□ 0.72
ClcnkaQ9WUB7 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ClcnkaQ9WUB7 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ClcnkaQ9WUB7 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ClcnkaQ9WUB7 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ClcnkaQ9WUB7 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
ClcnkaQ9WUB7 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ClcnkaQ9WUB7 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ClcnkaQ9WUB7 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ClcnkaQ9WUB7 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ClcnkaQ9WUB7 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ClcnkaQ9WUB7 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ClcnkaQ9WUB7 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ClcnkaQ9WUB7 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ClcnkaQ9WUB7 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ClcnkaQ9WUB7 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ClcnkaQ9WUB7 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ClcnkaQ9WUB7 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ClcnkaQ9WUB7 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
ClcnkaQ9WUB7 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ClcnkaQ9WUB7 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.49■□□□□ 0.71
ClcnkaQ9WUB7 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
ClcnkaQ9WUB7 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.49■□□□□ 0.71
ClcnkaQ9WUB7 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ClcnkaQ9WUB7 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ClcnkaQ9WUB7 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
ClcnkaQ9WUB7 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ClcnkaQ9WUB7 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ClcnkaQ9WUB7 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ClcnkaQ9WUB7 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ClcnkaQ9WUB7 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
ClcnkaQ9WUB7 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
ClcnkaQ9WUB7 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
ClcnkaQ9WUB7 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
ClcnkaQ9WUB7 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.48■□□□□ 0.71
ClcnkaQ9WUB7 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
ClcnkaQ9WUB7 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ClcnkaQ9WUB7 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ClcnkaQ9WUB7 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
ClcnkaQ9WUB7 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ClcnkaQ9WUB7 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ClcnkaQ9WUB7 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.47■□□□□ 0.71
ClcnkaQ9WUB7 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
ClcnkaQ9WUB7 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ClcnkaQ9WUB7 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ClcnkaQ9WUB7 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ClcnkaQ9WUB7 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.46■□□□□ 0.71
ClcnkaQ9WUB7 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ClcnkaQ9WUB7 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
ClcnkaQ9WUB7 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ClcnkaQ9WUB7 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ClcnkaQ9WUB7 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ClcnkaQ9WUB7 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ClcnkaQ9WUB7 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ClcnkaQ9WUB7 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ClcnkaQ9WUB7 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ClcnkaQ9WUB7 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
ClcnkaQ9WUB7 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ClcnkaQ9WUB7 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ClcnkaQ9WUB7 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ClcnkaQ9WUB7 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
ClcnkaQ9WUB7 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ClcnkaQ9WUB7 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ClcnkaQ9WUB7 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.44■□□□□ 0.7
ClcnkaQ9WUB7 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.44■□□□□ 0.7
ClcnkaQ9WUB7 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ClcnkaQ9WUB7 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ClcnkaQ9WUB7 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ClcnkaQ9WUB7 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
ClcnkaQ9WUB7 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ClcnkaQ9WUB7 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ClcnkaQ9WUB7 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ClcnkaQ9WUB7 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 100.8 ms