Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CcsQ9WU84 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CcsQ9WU84 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CcsQ9WU84 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
CcsQ9WU84 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CcsQ9WU84 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CcsQ9WU84 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC16.34■□□□□ 0.21
CcsQ9WU84 AC153524.1-201ENSMUST00000220436 1935 ntBASIC16.34■□□□□ 0.21
CcsQ9WU84 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CcsQ9WU84 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CcsQ9WU84 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC16.34■□□□□ 0.21
CcsQ9WU84 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CcsQ9WU84 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CcsQ9WU84 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CcsQ9WU84 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CcsQ9WU84 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CcsQ9WU84 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CcsQ9WU84 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CcsQ9WU84 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CcsQ9WU84 AC154454.1-201ENSMUST00000225253 216 ntBASIC16.33■□□□□ 0.2
CcsQ9WU84 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC16.33■□□□□ 0.2
CcsQ9WU84 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC16.33■□□□□ 0.2
CcsQ9WU84 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CcsQ9WU84 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CcsQ9WU84 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CcsQ9WU84 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CcsQ9WU84 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CcsQ9WU84 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CcsQ9WU84 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CcsQ9WU84 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CcsQ9WU84 Gm4799-201ENSMUST00000095396 657 ntBASIC16.31■□□□□ 0.2
CcsQ9WU84 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CcsQ9WU84 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CcsQ9WU84 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
CcsQ9WU84 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CcsQ9WU84 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.3■□□□□ 0.2
CcsQ9WU84 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CcsQ9WU84 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC16.3■□□□□ 0.2
CcsQ9WU84 Mir6538-201ENSMUST00000183713 110 ntBASIC16.3■□□□□ 0.2
CcsQ9WU84 Gm8093-201ENSMUST00000128935 1892 ntBASIC16.3■□□□□ 0.2
CcsQ9WU84 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CcsQ9WU84 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.3■□□□□ 0.2
CcsQ9WU84 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CcsQ9WU84 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CcsQ9WU84 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CcsQ9WU84 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CcsQ9WU84 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CcsQ9WU84 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CcsQ9WU84 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC16.29■□□□□ 0.2
CcsQ9WU84 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC16.29■□□□□ 0.2
CcsQ9WU84 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CcsQ9WU84 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC16.28■□□□□ 0.2
CcsQ9WU84 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CcsQ9WU84 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.28■□□□□ 0.2
CcsQ9WU84 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CcsQ9WU84 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CcsQ9WU84 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CcsQ9WU84 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CcsQ9WU84 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CcsQ9WU84 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CcsQ9WU84 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CcsQ9WU84 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
CcsQ9WU84 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CcsQ9WU84 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CcsQ9WU84 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CcsQ9WU84 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CcsQ9WU84 Mir3960-201ENSMUST00000198213 73 ntBASIC16.27■□□□□ 0.2
CcsQ9WU84 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CcsQ9WU84 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CcsQ9WU84 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CcsQ9WU84 Gm13889-201ENSMUST00000099689 1386 ntBASIC16.26■□□□□ 0.19
CcsQ9WU84 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CcsQ9WU84 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CcsQ9WU84 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CcsQ9WU84 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CcsQ9WU84 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CcsQ9WU84 Gm11175-201ENSMUST00000116172 543 ntBASIC16.26■□□□□ 0.19
CcsQ9WU84 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CcsQ9WU84 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CcsQ9WU84 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CcsQ9WU84 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CcsQ9WU84 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CcsQ9WU84 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CcsQ9WU84 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CcsQ9WU84 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CcsQ9WU84 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC16.25■□□□□ 0.19
CcsQ9WU84 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CcsQ9WU84 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CcsQ9WU84 Golph3-202ENSMUST00000226517 2359 ntBASIC16.24■□□□□ 0.19
CcsQ9WU84 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CcsQ9WU84 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC16.24■□□□□ 0.19
CcsQ9WU84 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CcsQ9WU84 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CcsQ9WU84 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC16.24■□□□□ 0.19
CcsQ9WU84 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CcsQ9WU84 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CcsQ9WU84 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CcsQ9WU84 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CcsQ9WU84 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CcsQ9WU84 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms