Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Clcf1Q9QZM3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Clcf1Q9QZM3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clcf1Q9QZM3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clcf1Q9QZM3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Clcf1Q9QZM3 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Clcf1Q9QZM3 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Clcf1Q9QZM3 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Clcf1Q9QZM3 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.24■□□□□ 0.67
Clcf1Q9QZM3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clcf1Q9QZM3 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Clcf1Q9QZM3 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clcf1Q9QZM3 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clcf1Q9QZM3 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clcf1Q9QZM3 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clcf1Q9QZM3 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clcf1Q9QZM3 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Clcf1Q9QZM3 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.23■□□□□ 0.67
Clcf1Q9QZM3 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Clcf1Q9QZM3 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Clcf1Q9QZM3 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clcf1Q9QZM3 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Clcf1Q9QZM3 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Clcf1Q9QZM3 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clcf1Q9QZM3 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Clcf1Q9QZM3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clcf1Q9QZM3 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Clcf1Q9QZM3 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Clcf1Q9QZM3 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.22■□□□□ 0.67
Clcf1Q9QZM3 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clcf1Q9QZM3 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.21■□□□□ 0.67
Clcf1Q9QZM3 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clcf1Q9QZM3 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.21■□□□□ 0.67
Clcf1Q9QZM3 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.21■□□□□ 0.67
Clcf1Q9QZM3 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.21■□□□□ 0.67
Clcf1Q9QZM3 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clcf1Q9QZM3 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Clcf1Q9QZM3 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clcf1Q9QZM3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Clcf1Q9QZM3 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clcf1Q9QZM3 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clcf1Q9QZM3 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Clcf1Q9QZM3 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Clcf1Q9QZM3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.19■□□□□ 0.66
Clcf1Q9QZM3 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Clcf1Q9QZM3 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcf1Q9QZM3 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Clcf1Q9QZM3 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Clcf1Q9QZM3 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcf1Q9QZM3 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcf1Q9QZM3 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcf1Q9QZM3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcf1Q9QZM3 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcf1Q9QZM3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcf1Q9QZM3 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Clcf1Q9QZM3 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.18■□□□□ 0.66
Clcf1Q9QZM3 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcf1Q9QZM3 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcf1Q9QZM3 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcf1Q9QZM3 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Clcf1Q9QZM3 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcf1Q9QZM3 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.17■□□□□ 0.66
Clcf1Q9QZM3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcf1Q9QZM3 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Clcf1Q9QZM3 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.17■□□□□ 0.66
Clcf1Q9QZM3 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcf1Q9QZM3 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcf1Q9QZM3 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcf1Q9QZM3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Clcf1Q9QZM3 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcf1Q9QZM3 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcf1Q9QZM3 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcf1Q9QZM3 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcf1Q9QZM3 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcf1Q9QZM3 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcf1Q9QZM3 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Clcf1Q9QZM3 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Clcf1Q9QZM3 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clcf1Q9QZM3 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.15■□□□□ 0.66
Clcf1Q9QZM3 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clcf1Q9QZM3 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Clcf1Q9QZM3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Clcf1Q9QZM3 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.15■□□□□ 0.66
Clcf1Q9QZM3 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.15■□□□□ 0.66
Clcf1Q9QZM3 Gm10232-201ENSMUST00000089221 720 ntBASIC19.15■□□□□ 0.66
Clcf1Q9QZM3 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clcf1Q9QZM3 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clcf1Q9QZM3 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Clcf1Q9QZM3 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Clcf1Q9QZM3 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clcf1Q9QZM3 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clcf1Q9QZM3 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clcf1Q9QZM3 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Clcf1Q9QZM3 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clcf1Q9QZM3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.13■□□□□ 0.65
Clcf1Q9QZM3 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.13■□□□□ 0.65
Clcf1Q9QZM3 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Clcf1Q9QZM3 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clcf1Q9QZM3 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.13■□□□□ 0.65
Clcf1Q9QZM3 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms