Protein–RNA interactions for Protein: Q9QZ88

Vps29, Vacuolar protein sorting-associated protein 29, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps29Q9QZ88 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Vps29Q9QZ88 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.43■□□□□ 0.86
Vps29Q9QZ88 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Vps29Q9QZ88 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Vps29Q9QZ88 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
Vps29Q9QZ88 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vps29Q9QZ88 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.42■□□□□ 0.86
Vps29Q9QZ88 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Vps29Q9QZ88 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps29Q9QZ88 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.42■□□□□ 0.86
Vps29Q9QZ88 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.42■□□□□ 0.86
Vps29Q9QZ88 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.42■□□□□ 0.86
Vps29Q9QZ88 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps29Q9QZ88 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vps29Q9QZ88 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.41■□□□□ 0.86
Vps29Q9QZ88 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vps29Q9QZ88 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Vps29Q9QZ88 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vps29Q9QZ88 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vps29Q9QZ88 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Vps29Q9QZ88 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vps29Q9QZ88 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.41■□□□□ 0.86
Vps29Q9QZ88 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.4■□□□□ 0.86
Vps29Q9QZ88 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vps29Q9QZ88 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.4■□□□□ 0.86
Vps29Q9QZ88 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Vps29Q9QZ88 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Vps29Q9QZ88 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Vps29Q9QZ88 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.39■□□□□ 0.86
Vps29Q9QZ88 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.39■□□□□ 0.85
Vps29Q9QZ88 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vps29Q9QZ88 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vps29Q9QZ88 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vps29Q9QZ88 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vps29Q9QZ88 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vps29Q9QZ88 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vps29Q9QZ88 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Vps29Q9QZ88 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vps29Q9QZ88 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Vps29Q9QZ88 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vps29Q9QZ88 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vps29Q9QZ88 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
Vps29Q9QZ88 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.37■□□□□ 0.85
Vps29Q9QZ88 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Vps29Q9QZ88 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.37■□□□□ 0.85
Vps29Q9QZ88 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vps29Q9QZ88 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vps29Q9QZ88 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.37■□□□□ 0.85
Vps29Q9QZ88 Gm10420-201ENSMUST00000121713 882 ntBASIC20.36■□□□□ 0.85
Vps29Q9QZ88 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.36■□□□□ 0.85
Vps29Q9QZ88 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Vps29Q9QZ88 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Vps29Q9QZ88 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Vps29Q9QZ88 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Vps29Q9QZ88 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.36■□□□□ 0.85
Vps29Q9QZ88 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vps29Q9QZ88 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vps29Q9QZ88 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Vps29Q9QZ88 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vps29Q9QZ88 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vps29Q9QZ88 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vps29Q9QZ88 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vps29Q9QZ88 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Vps29Q9QZ88 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.35■□□□□ 0.85
Vps29Q9QZ88 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vps29Q9QZ88 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Vps29Q9QZ88 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vps29Q9QZ88 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.34■□□□□ 0.85
Vps29Q9QZ88 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Vps29Q9QZ88 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Vps29Q9QZ88 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vps29Q9QZ88 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Vps29Q9QZ88 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vps29Q9QZ88 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vps29Q9QZ88 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.34■□□□□ 0.85
Vps29Q9QZ88 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vps29Q9QZ88 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
Vps29Q9QZ88 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Vps29Q9QZ88 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vps29Q9QZ88 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Vps29Q9QZ88 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.33■□□□□ 0.84
Vps29Q9QZ88 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.32■□□□□ 0.84
Vps29Q9QZ88 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vps29Q9QZ88 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vps29Q9QZ88 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.32■□□□□ 0.84
Vps29Q9QZ88 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.32■□□□□ 0.84
Vps29Q9QZ88 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.32■□□□□ 0.84
Vps29Q9QZ88 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vps29Q9QZ88 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.32■□□□□ 0.84
Vps29Q9QZ88 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vps29Q9QZ88 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Vps29Q9QZ88 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vps29Q9QZ88 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vps29Q9QZ88 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vps29Q9QZ88 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Vps29Q9QZ88 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vps29Q9QZ88 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Vps29Q9QZ88 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Vps29Q9QZ88 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vps29Q9QZ88 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms