Protein–RNA interactions for Protein: Q9JJX7

Tdp2, Tyrosyl-DNA phosphodiesterase 2, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp2Q9JJX7 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tdp2Q9JJX7 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.04■□□□□ 0.96
Tdp2Q9JJX7 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Tdp2Q9JJX7 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tdp2Q9JJX7 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tdp2Q9JJX7 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tdp2Q9JJX7 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.04■□□□□ 0.96
Tdp2Q9JJX7 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Tdp2Q9JJX7 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.03■□□□□ 0.96
Tdp2Q9JJX7 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Tdp2Q9JJX7 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.03■□□□□ 0.96
Tdp2Q9JJX7 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tdp2Q9JJX7 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tdp2Q9JJX7 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tdp2Q9JJX7 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Tdp2Q9JJX7 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.02■□□□□ 0.96
Tdp2Q9JJX7 Gm7332-201ENSMUST00000118351 454 ntBASIC21.02■□□□□ 0.96
Tdp2Q9JJX7 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tdp2Q9JJX7 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Tdp2Q9JJX7 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Tdp2Q9JJX7 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tdp2Q9JJX7 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Tdp2Q9JJX7 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.01■□□□□ 0.95
Tdp2Q9JJX7 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tdp2Q9JJX7 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Tdp2Q9JJX7 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tdp2Q9JJX7 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tdp2Q9JJX7 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tdp2Q9JJX7 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tdp2Q9JJX7 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tdp2Q9JJX7 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tdp2Q9JJX7 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tdp2Q9JJX7 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tdp2Q9JJX7 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tdp2Q9JJX7 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tdp2Q9JJX7 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tdp2Q9JJX7 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tdp2Q9JJX7 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21■□□□□ 0.95
Tdp2Q9JJX7 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
Tdp2Q9JJX7 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.99■□□□□ 0.95
Tdp2Q9JJX7 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tdp2Q9JJX7 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tdp2Q9JJX7 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tdp2Q9JJX7 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tdp2Q9JJX7 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tdp2Q9JJX7 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tdp2Q9JJX7 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tdp2Q9JJX7 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tdp2Q9JJX7 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tdp2Q9JJX7 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
Tdp2Q9JJX7 Gm27502-201ENSMUST00000183495 199 ntBASIC20.97■□□□□ 0.95
Tdp2Q9JJX7 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tdp2Q9JJX7 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tdp2Q9JJX7 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.96■□□□□ 0.95
Tdp2Q9JJX7 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tdp2Q9JJX7 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tdp2Q9JJX7 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.96■□□□□ 0.95
Tdp2Q9JJX7 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.96■□□□□ 0.95
Tdp2Q9JJX7 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
Tdp2Q9JJX7 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Tdp2Q9JJX7 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tdp2Q9JJX7 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Tdp2Q9JJX7 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Tdp2Q9JJX7 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tdp2Q9JJX7 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tdp2Q9JJX7 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tdp2Q9JJX7 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tdp2Q9JJX7 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
Tdp2Q9JJX7 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.94■□□□□ 0.94
Tdp2Q9JJX7 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tdp2Q9JJX7 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Tdp2Q9JJX7 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Tdp2Q9JJX7 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tdp2Q9JJX7 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Tdp2Q9JJX7 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.93■□□□□ 0.94
Tdp2Q9JJX7 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tdp2Q9JJX7 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tdp2Q9JJX7 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.93■□□□□ 0.94
Tdp2Q9JJX7 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Tdp2Q9JJX7 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tdp2Q9JJX7 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Tdp2Q9JJX7 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tdp2Q9JJX7 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.92■□□□□ 0.94
Tdp2Q9JJX7 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tdp2Q9JJX7 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tdp2Q9JJX7 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tdp2Q9JJX7 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.92■□□□□ 0.94
Tdp2Q9JJX7 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tdp2Q9JJX7 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tdp2Q9JJX7 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tdp2Q9JJX7 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Tdp2Q9JJX7 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Tdp2Q9JJX7 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Tdp2Q9JJX7 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Tdp2Q9JJX7 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tdp2Q9JJX7 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tdp2Q9JJX7 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tdp2Q9JJX7 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tdp2Q9JJX7 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tdp2Q9JJX7 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms