Protein–RNA interactions for Protein: Q9EQ80

Nif3l1, NIF3-like protein 1, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nif3l1Q9EQ80 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nif3l1Q9EQ80 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nif3l1Q9EQ80 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.19■□□□□ 0.98
Nif3l1Q9EQ80 Gm45444-201ENSMUST00000211394 898 ntBASIC21.19■□□□□ 0.98
Nif3l1Q9EQ80 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nif3l1Q9EQ80 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.19■□□□□ 0.98
Nif3l1Q9EQ80 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nif3l1Q9EQ80 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nif3l1Q9EQ80 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nif3l1Q9EQ80 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Nif3l1Q9EQ80 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nif3l1Q9EQ80 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nif3l1Q9EQ80 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.18■□□□□ 0.98
Nif3l1Q9EQ80 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Nif3l1Q9EQ80 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.18■□□□□ 0.98
Nif3l1Q9EQ80 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Nif3l1Q9EQ80 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nif3l1Q9EQ80 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nif3l1Q9EQ80 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nif3l1Q9EQ80 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nif3l1Q9EQ80 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nif3l1Q9EQ80 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nif3l1Q9EQ80 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nif3l1Q9EQ80 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Nif3l1Q9EQ80 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nif3l1Q9EQ80 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nif3l1Q9EQ80 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nif3l1Q9EQ80 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Nif3l1Q9EQ80 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.16■□□□□ 0.98
Nif3l1Q9EQ80 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Nif3l1Q9EQ80 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Nif3l1Q9EQ80 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nif3l1Q9EQ80 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nif3l1Q9EQ80 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
Nif3l1Q9EQ80 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nif3l1Q9EQ80 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nif3l1Q9EQ80 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nif3l1Q9EQ80 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Nif3l1Q9EQ80 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nif3l1Q9EQ80 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Nif3l1Q9EQ80 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nif3l1Q9EQ80 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.13■□□□□ 0.97
Nif3l1Q9EQ80 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Nif3l1Q9EQ80 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nif3l1Q9EQ80 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
Nif3l1Q9EQ80 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nif3l1Q9EQ80 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Nif3l1Q9EQ80 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nif3l1Q9EQ80 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Nif3l1Q9EQ80 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Nif3l1Q9EQ80 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.12■□□□□ 0.97
Nif3l1Q9EQ80 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nif3l1Q9EQ80 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nif3l1Q9EQ80 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.12■□□□□ 0.97
Nif3l1Q9EQ80 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nif3l1Q9EQ80 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Nif3l1Q9EQ80 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Nif3l1Q9EQ80 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nif3l1Q9EQ80 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nif3l1Q9EQ80 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Nif3l1Q9EQ80 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nif3l1Q9EQ80 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nif3l1Q9EQ80 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.11■□□□□ 0.97
Nif3l1Q9EQ80 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nif3l1Q9EQ80 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nif3l1Q9EQ80 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nif3l1Q9EQ80 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nif3l1Q9EQ80 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nif3l1Q9EQ80 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nif3l1Q9EQ80 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nif3l1Q9EQ80 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nif3l1Q9EQ80 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nif3l1Q9EQ80 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nif3l1Q9EQ80 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nif3l1Q9EQ80 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.09■□□□□ 0.97
Nif3l1Q9EQ80 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Nif3l1Q9EQ80 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Nif3l1Q9EQ80 Gm13238-201ENSMUST00000117655 780 ntBASIC21.09■□□□□ 0.97
Nif3l1Q9EQ80 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.09■□□□□ 0.97
Nif3l1Q9EQ80 Gm43566-201ENSMUST00000196851 808 ntBASIC21.09■□□□□ 0.97
Nif3l1Q9EQ80 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nif3l1Q9EQ80 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nif3l1Q9EQ80 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nif3l1Q9EQ80 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.08■□□□□ 0.97
Nif3l1Q9EQ80 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.08■□□□□ 0.97
Nif3l1Q9EQ80 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.08■□□□□ 0.97
Nif3l1Q9EQ80 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Nif3l1Q9EQ80 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.08■□□□□ 0.97
Nif3l1Q9EQ80 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nif3l1Q9EQ80 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Nif3l1Q9EQ80 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Nif3l1Q9EQ80 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Nif3l1Q9EQ80 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Nif3l1Q9EQ80 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Nif3l1Q9EQ80 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Nif3l1Q9EQ80 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nif3l1Q9EQ80 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nif3l1Q9EQ80 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.06■□□□□ 0.96
Nif3l1Q9EQ80 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nif3l1Q9EQ80 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms