Protein–RNA interactions for Protein: Q9DA19

Cir1, Corepressor interacting with RBPJ 1, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cir1Q9DA19 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cir1Q9DA19 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cir1Q9DA19 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cir1Q9DA19 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cir1Q9DA19 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cir1Q9DA19 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cir1Q9DA19 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cir1Q9DA19 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cir1Q9DA19 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.32■□□□□ 0.52
Cir1Q9DA19 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Cir1Q9DA19 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Cir1Q9DA19 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cir1Q9DA19 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cir1Q9DA19 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cir1Q9DA19 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cir1Q9DA19 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cir1Q9DA19 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cir1Q9DA19 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Cir1Q9DA19 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cir1Q9DA19 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Cir1Q9DA19 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.3■□□□□ 0.52
Cir1Q9DA19 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cir1Q9DA19 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cir1Q9DA19 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cir1Q9DA19 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cir1Q9DA19 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cir1Q9DA19 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cir1Q9DA19 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.29■□□□□ 0.52
Cir1Q9DA19 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cir1Q9DA19 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cir1Q9DA19 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cir1Q9DA19 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cir1Q9DA19 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Cir1Q9DA19 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cir1Q9DA19 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cir1Q9DA19 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cir1Q9DA19 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cir1Q9DA19 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cir1Q9DA19 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Cir1Q9DA19 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cir1Q9DA19 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Cir1Q9DA19 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cir1Q9DA19 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cir1Q9DA19 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cir1Q9DA19 Gm37136-201ENSMUST00000194368 194 ntBASIC18.27■□□□□ 0.52
Cir1Q9DA19 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cir1Q9DA19 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Cir1Q9DA19 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Cir1Q9DA19 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cir1Q9DA19 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cir1Q9DA19 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Cir1Q9DA19 Gm7332-201ENSMUST00000118351 454 ntBASIC18.26■□□□□ 0.51
Cir1Q9DA19 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.26■□□□□ 0.51
Cir1Q9DA19 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cir1Q9DA19 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.26■□□□□ 0.51
Cir1Q9DA19 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cir1Q9DA19 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cir1Q9DA19 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cir1Q9DA19 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Cir1Q9DA19 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cir1Q9DA19 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Cir1Q9DA19 Gm45364-201ENSMUST00000210883 159 ntBASIC18.25■□□□□ 0.51
Cir1Q9DA19 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cir1Q9DA19 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cir1Q9DA19 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cir1Q9DA19 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cir1Q9DA19 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.24■□□□□ 0.51
Cir1Q9DA19 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Cir1Q9DA19 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cir1Q9DA19 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cir1Q9DA19 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cir1Q9DA19 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cir1Q9DA19 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Cir1Q9DA19 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
Cir1Q9DA19 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cir1Q9DA19 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.23■□□□□ 0.51
Cir1Q9DA19 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Cir1Q9DA19 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cir1Q9DA19 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cir1Q9DA19 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.23■□□□□ 0.51
Cir1Q9DA19 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.23■□□□□ 0.51
Cir1Q9DA19 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cir1Q9DA19 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cir1Q9DA19 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Cir1Q9DA19 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cir1Q9DA19 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cir1Q9DA19 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cir1Q9DA19 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.22■□□□□ 0.51
Cir1Q9DA19 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cir1Q9DA19 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cir1Q9DA19 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.22■□□□□ 0.51
Cir1Q9DA19 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Cir1Q9DA19 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cir1Q9DA19 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.21■□□□□ 0.51
Cir1Q9DA19 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.21■□□□□ 0.51
Cir1Q9DA19 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cir1Q9DA19 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Cir1Q9DA19 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Cir1Q9DA19 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Cir1Q9DA19 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms