Protein–RNA interactions for Protein: Q9D7I0

Shisa5, Protein shisa-5, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa5Q9D7I0 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shisa5Q9D7I0 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shisa5Q9D7I0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Shisa5Q9D7I0 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.35■□□□□ 0.69
Shisa5Q9D7I0 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shisa5Q9D7I0 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Shisa5Q9D7I0 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
Shisa5Q9D7I0 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shisa5Q9D7I0 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shisa5Q9D7I0 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shisa5Q9D7I0 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shisa5Q9D7I0 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shisa5Q9D7I0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.34■□□□□ 0.69
Shisa5Q9D7I0 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shisa5Q9D7I0 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shisa5Q9D7I0 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.34■□□□□ 0.69
Shisa5Q9D7I0 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Shisa5Q9D7I0 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shisa5Q9D7I0 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.33■□□□□ 0.69
Shisa5Q9D7I0 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.33■□□□□ 0.69
Shisa5Q9D7I0 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Shisa5Q9D7I0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.33■□□□□ 0.69
Shisa5Q9D7I0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.33■□□□□ 0.68
Shisa5Q9D7I0 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.33■□□□□ 0.68
Shisa5Q9D7I0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Shisa5Q9D7I0 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Shisa5Q9D7I0 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Shisa5Q9D7I0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Shisa5Q9D7I0 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shisa5Q9D7I0 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Shisa5Q9D7I0 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shisa5Q9D7I0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.31■□□□□ 0.68
Shisa5Q9D7I0 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shisa5Q9D7I0 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Shisa5Q9D7I0 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shisa5Q9D7I0 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shisa5Q9D7I0 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.3■□□□□ 0.68
Shisa5Q9D7I0 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Shisa5Q9D7I0 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.3■□□□□ 0.68
Shisa5Q9D7I0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Shisa5Q9D7I0 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shisa5Q9D7I0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Shisa5Q9D7I0 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Shisa5Q9D7I0 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shisa5Q9D7I0 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.29■□□□□ 0.68
Shisa5Q9D7I0 Gm45444-201ENSMUST00000211394 898 ntBASIC19.29■□□□□ 0.68
Shisa5Q9D7I0 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
Shisa5Q9D7I0 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shisa5Q9D7I0 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Shisa5Q9D7I0 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shisa5Q9D7I0 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Shisa5Q9D7I0 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shisa5Q9D7I0 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shisa5Q9D7I0 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Shisa5Q9D7I0 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Shisa5Q9D7I0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Shisa5Q9D7I0 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shisa5Q9D7I0 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.28■□□□□ 0.68
Shisa5Q9D7I0 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shisa5Q9D7I0 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Shisa5Q9D7I0 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Shisa5Q9D7I0 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shisa5Q9D7I0 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shisa5Q9D7I0 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.27■□□□□ 0.68
Shisa5Q9D7I0 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Shisa5Q9D7I0 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shisa5Q9D7I0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Shisa5Q9D7I0 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shisa5Q9D7I0 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shisa5Q9D7I0 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Shisa5Q9D7I0 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shisa5Q9D7I0 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.26■□□□□ 0.67
Shisa5Q9D7I0 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shisa5Q9D7I0 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shisa5Q9D7I0 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Shisa5Q9D7I0 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Shisa5Q9D7I0 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shisa5Q9D7I0 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shisa5Q9D7I0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shisa5Q9D7I0 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shisa5Q9D7I0 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.24■□□□□ 0.67
Shisa5Q9D7I0 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Shisa5Q9D7I0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Shisa5Q9D7I0 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shisa5Q9D7I0 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Shisa5Q9D7I0 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shisa5Q9D7I0 Gm43566-201ENSMUST00000196851 808 ntBASIC19.23■□□□□ 0.67
Shisa5Q9D7I0 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shisa5Q9D7I0 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shisa5Q9D7I0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shisa5Q9D7I0 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.22■□□□□ 0.67
Shisa5Q9D7I0 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shisa5Q9D7I0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Shisa5Q9D7I0 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shisa5Q9D7I0 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Shisa5Q9D7I0 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Shisa5Q9D7I0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shisa5Q9D7I0 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Shisa5Q9D7I0 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shisa5Q9D7I0 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms