Protein–RNA interactions for Protein: Q9D6I0

Rtl8c, Cxx1c protein, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl8cQ9D6I0 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
Rtl8cQ9D6I0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rtl8cQ9D6I0 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rtl8cQ9D6I0 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rtl8cQ9D6I0 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rtl8cQ9D6I0 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Rtl8cQ9D6I0 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rtl8cQ9D6I0 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rtl8cQ9D6I0 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rtl8cQ9D6I0 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rtl8cQ9D6I0 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.03■□□□□ 0.64
Rtl8cQ9D6I0 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rtl8cQ9D6I0 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rtl8cQ9D6I0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rtl8cQ9D6I0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rtl8cQ9D6I0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rtl8cQ9D6I0 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Rtl8cQ9D6I0 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.03■□□□□ 0.64
Rtl8cQ9D6I0 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rtl8cQ9D6I0 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rtl8cQ9D6I0 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rtl8cQ9D6I0 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Rtl8cQ9D6I0 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rtl8cQ9D6I0 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.02■□□□□ 0.64
Rtl8cQ9D6I0 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Rtl8cQ9D6I0 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rtl8cQ9D6I0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Rtl8cQ9D6I0 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rtl8cQ9D6I0 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.01■□□□□ 0.63
Rtl8cQ9D6I0 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rtl8cQ9D6I0 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rtl8cQ9D6I0 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rtl8cQ9D6I0 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
Rtl8cQ9D6I0 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rtl8cQ9D6I0 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rtl8cQ9D6I0 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19■□□□□ 0.63
Rtl8cQ9D6I0 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
Rtl8cQ9D6I0 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rtl8cQ9D6I0 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19■□□□□ 0.63
Rtl8cQ9D6I0 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19■□□□□ 0.63
Rtl8cQ9D6I0 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19■□□□□ 0.63
Rtl8cQ9D6I0 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rtl8cQ9D6I0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Rtl8cQ9D6I0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rtl8cQ9D6I0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Rtl8cQ9D6I0 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Rtl8cQ9D6I0 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Rtl8cQ9D6I0 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rtl8cQ9D6I0 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rtl8cQ9D6I0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Rtl8cQ9D6I0 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Rtl8cQ9D6I0 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.99■□□□□ 0.63
Rtl8cQ9D6I0 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.99■□□□□ 0.63
Rtl8cQ9D6I0 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.99■□□□□ 0.63
Rtl8cQ9D6I0 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rtl8cQ9D6I0 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rtl8cQ9D6I0 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rtl8cQ9D6I0 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rtl8cQ9D6I0 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rtl8cQ9D6I0 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rtl8cQ9D6I0 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rtl8cQ9D6I0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rtl8cQ9D6I0 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rtl8cQ9D6I0 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rtl8cQ9D6I0 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.98■□□□□ 0.63
Rtl8cQ9D6I0 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rtl8cQ9D6I0 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rtl8cQ9D6I0 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rtl8cQ9D6I0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Rtl8cQ9D6I0 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rtl8cQ9D6I0 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.97■□□□□ 0.63
Rtl8cQ9D6I0 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.97■□□□□ 0.63
Rtl8cQ9D6I0 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rtl8cQ9D6I0 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rtl8cQ9D6I0 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rtl8cQ9D6I0 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rtl8cQ9D6I0 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rtl8cQ9D6I0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Rtl8cQ9D6I0 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rtl8cQ9D6I0 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rtl8cQ9D6I0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Rtl8cQ9D6I0 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rtl8cQ9D6I0 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.96■□□□□ 0.63
Rtl8cQ9D6I0 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Rtl8cQ9D6I0 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.96■□□□□ 0.63
Rtl8cQ9D6I0 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rtl8cQ9D6I0 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rtl8cQ9D6I0 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rtl8cQ9D6I0 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
Rtl8cQ9D6I0 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rtl8cQ9D6I0 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Rtl8cQ9D6I0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rtl8cQ9D6I0 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.95■□□□□ 0.62
Rtl8cQ9D6I0 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rtl8cQ9D6I0 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rtl8cQ9D6I0 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Rtl8cQ9D6I0 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rtl8cQ9D6I0 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rtl8cQ9D6I0 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rtl8cQ9D6I0 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms