Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Snrnp48Q9D361 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.31■■□□□ 1
Snrnp48Q9D361 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Snrnp48Q9D361 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.3■■□□□ 1
Snrnp48Q9D361 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Snrnp48Q9D361 Gm5921-201ENSMUST00000075898 882 ntBASIC21.3■■□□□ 1
Snrnp48Q9D361 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Snrnp48Q9D361 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Snrnp48Q9D361 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
Snrnp48Q9D361 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.29■■□□□ 1
Snrnp48Q9D361 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.29■■□□□ 1
Snrnp48Q9D361 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Snrnp48Q9D361 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.29■■□□□ 1
Snrnp48Q9D361 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Snrnp48Q9D361 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.29■■□□□ 1
Snrnp48Q9D361 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Snrnp48Q9D361 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.28■■□□□ 1
Snrnp48Q9D361 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.28■■□□□ 1
Snrnp48Q9D361 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Snrnp48Q9D361 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Snrnp48Q9D361 Gm45444-201ENSMUST00000211394 898 ntBASIC21.28■■□□□ 1
Snrnp48Q9D361 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.28■■□□□ 1
Snrnp48Q9D361 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.28■■□□□ 1
Snrnp48Q9D361 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.28■■□□□ 1
Snrnp48Q9D361 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Snrnp48Q9D361 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.27■■□□□ 1
Snrnp48Q9D361 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.27■■□□□ 1
Snrnp48Q9D361 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.27■■□□□ 1
Snrnp48Q9D361 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Snrnp48Q9D361 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Snrnp48Q9D361 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Snrnp48Q9D361 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.27■□□□□ 0.99
Snrnp48Q9D361 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.26■□□□□ 0.99
Snrnp48Q9D361 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Snrnp48Q9D361 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Snrnp48Q9D361 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Snrnp48Q9D361 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.26■□□□□ 0.99
Snrnp48Q9D361 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Snrnp48Q9D361 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Snrnp48Q9D361 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.26■□□□□ 0.99
Snrnp48Q9D361 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Snrnp48Q9D361 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Snrnp48Q9D361 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Snrnp48Q9D361 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Snrnp48Q9D361 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Snrnp48Q9D361 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Snrnp48Q9D361 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Snrnp48Q9D361 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Snrnp48Q9D361 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.24■□□□□ 0.99
Snrnp48Q9D361 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Snrnp48Q9D361 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Snrnp48Q9D361 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
Snrnp48Q9D361 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Snrnp48Q9D361 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Snrnp48Q9D361 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.23■□□□□ 0.99
Snrnp48Q9D361 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Snrnp48Q9D361 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Snrnp48Q9D361 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
Snrnp48Q9D361 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Snrnp48Q9D361 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Snrnp48Q9D361 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Snrnp48Q9D361 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.22■□□□□ 0.99
Snrnp48Q9D361 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Snrnp48Q9D361 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Snrnp48Q9D361 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Snrnp48Q9D361 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Snrnp48Q9D361 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Snrnp48Q9D361 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Snrnp48Q9D361 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Snrnp48Q9D361 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Snrnp48Q9D361 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Snrnp48Q9D361 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Snrnp48Q9D361 Gm43566-201ENSMUST00000196851 808 ntBASIC21.21■□□□□ 0.99
Snrnp48Q9D361 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Snrnp48Q9D361 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Snrnp48Q9D361 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Snrnp48Q9D361 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.21■□□□□ 0.99
Snrnp48Q9D361 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.21■□□□□ 0.99
Snrnp48Q9D361 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Snrnp48Q9D361 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Snrnp48Q9D361 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Snrnp48Q9D361 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Snrnp48Q9D361 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Snrnp48Q9D361 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Snrnp48Q9D361 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.2■□□□□ 0.98
Snrnp48Q9D361 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Snrnp48Q9D361 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Snrnp48Q9D361 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.2■□□□□ 0.98
Snrnp48Q9D361 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.2■□□□□ 0.98
Snrnp48Q9D361 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Snrnp48Q9D361 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Snrnp48Q9D361 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.19■□□□□ 0.98
Snrnp48Q9D361 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.19■□□□□ 0.98
Snrnp48Q9D361 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Snrnp48Q9D361 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Snrnp48Q9D361 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Snrnp48Q9D361 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Snrnp48Q9D361 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Snrnp48Q9D361 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Snrnp48Q9D361 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms