Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Rnf135Q9CWS1 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC22.12■■□□□ 1.13
Rnf135Q9CWS1 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Rnf135Q9CWS1 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rnf135Q9CWS1 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rnf135Q9CWS1 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rnf135Q9CWS1 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Rnf135Q9CWS1 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rnf135Q9CWS1 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Rnf135Q9CWS1 Gm42418-201ENSMUST00000182010 1831 ntBASIC22.12■■□□□ 1.13
Rnf135Q9CWS1 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rnf135Q9CWS1 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rnf135Q9CWS1 Gm10420-201ENSMUST00000121713 882 ntBASIC22.11■■□□□ 1.13
Rnf135Q9CWS1 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rnf135Q9CWS1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rnf135Q9CWS1 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rnf135Q9CWS1 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC22.11■■□□□ 1.13
Rnf135Q9CWS1 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Rnf135Q9CWS1 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rnf135Q9CWS1 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rnf135Q9CWS1 Gm12504-201ENSMUST00000120860 2231 ntBASIC22.1■■□□□ 1.13
Rnf135Q9CWS1 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rnf135Q9CWS1 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Rnf135Q9CWS1 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rnf135Q9CWS1 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rnf135Q9CWS1 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.1■■□□□ 1.13
Rnf135Q9CWS1 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rnf135Q9CWS1 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.1■■□□□ 1.13
Rnf135Q9CWS1 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Rnf135Q9CWS1 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rnf135Q9CWS1 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rnf135Q9CWS1 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rnf135Q9CWS1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Rnf135Q9CWS1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rnf135Q9CWS1 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Rnf135Q9CWS1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rnf135Q9CWS1 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC22.09■■□□□ 1.13
Rnf135Q9CWS1 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Rnf135Q9CWS1 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rnf135Q9CWS1 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rnf135Q9CWS1 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Rnf135Q9CWS1 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Rnf135Q9CWS1 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Rnf135Q9CWS1 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC22.08■■□□□ 1.13
Rnf135Q9CWS1 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.08■■□□□ 1.13
Rnf135Q9CWS1 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Rnf135Q9CWS1 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Rnf135Q9CWS1 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rnf135Q9CWS1 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC22.07■■□□□ 1.12
Rnf135Q9CWS1 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Rnf135Q9CWS1 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rnf135Q9CWS1 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rnf135Q9CWS1 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Rnf135Q9CWS1 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC22.06■■□□□ 1.12
Rnf135Q9CWS1 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC22.06■■□□□ 1.12
Rnf135Q9CWS1 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Rnf135Q9CWS1 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rnf135Q9CWS1 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Rnf135Q9CWS1 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rnf135Q9CWS1 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rnf135Q9CWS1 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rnf135Q9CWS1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Rnf135Q9CWS1 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
Rnf135Q9CWS1 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Rnf135Q9CWS1 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Rnf135Q9CWS1 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rnf135Q9CWS1 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Rnf135Q9CWS1 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rnf135Q9CWS1 Gm20634-201ENSMUST00000090779 2956 ntBASIC22.05■■□□□ 1.12
Rnf135Q9CWS1 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Rnf135Q9CWS1 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rnf135Q9CWS1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC22.04■■□□□ 1.12
Rnf135Q9CWS1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Rnf135Q9CWS1 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rnf135Q9CWS1 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rnf135Q9CWS1 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rnf135Q9CWS1 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rnf135Q9CWS1 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rnf135Q9CWS1 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rnf135Q9CWS1 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rnf135Q9CWS1 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rnf135Q9CWS1 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rnf135Q9CWS1 Gm5812-201ENSMUST00000061073 957 ntBASIC22.03■■□□□ 1.12
Rnf135Q9CWS1 Gm5921-201ENSMUST00000075898 882 ntBASIC22.03■■□□□ 1.12
Rnf135Q9CWS1 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rnf135Q9CWS1 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rnf135Q9CWS1 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Rnf135Q9CWS1 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Rnf135Q9CWS1 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rnf135Q9CWS1 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.02■■□□□ 1.12
Rnf135Q9CWS1 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rnf135Q9CWS1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rnf135Q9CWS1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rnf135Q9CWS1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Rnf135Q9CWS1 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC22.02■■□□□ 1.12
Rnf135Q9CWS1 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Rnf135Q9CWS1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rnf135Q9CWS1 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rnf135Q9CWS1 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rnf135Q9CWS1 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms