Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.87■■□□□ 1.09
Pcdhb11Q91UZ8 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Pcdhb11Q91UZ8 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.86■■□□□ 1.09
Pcdhb11Q91UZ8 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhb11Q91UZ8 Gm43566-201ENSMUST00000196851 808 ntBASIC21.86■■□□□ 1.09
Pcdhb11Q91UZ8 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Pcdhb11Q91UZ8 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhb11Q91UZ8 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhb11Q91UZ8 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.86■■□□□ 1.09
Pcdhb11Q91UZ8 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb11Q91UZ8 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb11Q91UZ8 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb11Q91UZ8 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb11Q91UZ8 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.85■■□□□ 1.09
Pcdhb11Q91UZ8 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb11Q91UZ8 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb11Q91UZ8 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb11Q91UZ8 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb11Q91UZ8 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb11Q91UZ8 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb11Q91UZ8 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb11Q91UZ8 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb11Q91UZ8 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhb11Q91UZ8 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhb11Q91UZ8 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhb11Q91UZ8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.83■■□□□ 1.09
Pcdhb11Q91UZ8 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhb11Q91UZ8 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhb11Q91UZ8 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdhb11Q91UZ8 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhb11Q91UZ8 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhb11Q91UZ8 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhb11Q91UZ8 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
Pcdhb11Q91UZ8 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb11Q91UZ8 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb11Q91UZ8 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb11Q91UZ8 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb11Q91UZ8 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb11Q91UZ8 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb11Q91UZ8 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb11Q91UZ8 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb11Q91UZ8 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Pcdhb11Q91UZ8 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.8■■□□□ 1.08
Pcdhb11Q91UZ8 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb11Q91UZ8 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb11Q91UZ8 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb11Q91UZ8 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.79■■□□□ 1.08
Pcdhb11Q91UZ8 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb11Q91UZ8 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb11Q91UZ8 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb11Q91UZ8 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb11Q91UZ8 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhb11Q91UZ8 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Pcdhb11Q91UZ8 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.78■■□□□ 1.08
Pcdhb11Q91UZ8 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.78■■□□□ 1.08
Pcdhb11Q91UZ8 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhb11Q91UZ8 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhb11Q91UZ8 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.77■■□□□ 1.08
Pcdhb11Q91UZ8 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb11Q91UZ8 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb11Q91UZ8 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb11Q91UZ8 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Pcdhb11Q91UZ8 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb11Q91UZ8 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb11Q91UZ8 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb11Q91UZ8 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb11Q91UZ8 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Pcdhb11Q91UZ8 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.76■■□□□ 1.07
Pcdhb11Q91UZ8 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb11Q91UZ8 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb11Q91UZ8 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb11Q91UZ8 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.76■■□□□ 1.07
Pcdhb11Q91UZ8 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb11Q91UZ8 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.75■■□□□ 1.07
Pcdhb11Q91UZ8 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Pcdhb11Q91UZ8 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.75■■□□□ 1.07
Pcdhb11Q91UZ8 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb11Q91UZ8 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb11Q91UZ8 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb11Q91UZ8 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb11Q91UZ8 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.75■■□□□ 1.07
Pcdhb11Q91UZ8 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb11Q91UZ8 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb11Q91UZ8 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb11Q91UZ8 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Pcdhb11Q91UZ8 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.74■■□□□ 1.07
Pcdhb11Q91UZ8 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.74■■□□□ 1.07
Pcdhb11Q91UZ8 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.74■■□□□ 1.07
Pcdhb11Q91UZ8 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb11Q91UZ8 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb11Q91UZ8 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Pcdhb11Q91UZ8 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb11Q91UZ8 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Pcdhb11Q91UZ8 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Pcdhb11Q91UZ8 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb11Q91UZ8 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb11Q91UZ8 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb11Q91UZ8 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb11Q91UZ8 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb11Q91UZ8 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 205.3 ms